/single_cell_clustering_notebook

Primary LanguageJupyter NotebookBSD 3-Clause "New" or "Revised" LicenseBSD-3-Clause

Single-cell RNA-seq Clustering Analysis Notebook

DOI Binder

Try out the notebook by launching the binder above. It may be slow to launch while it installs package dependencies.

Local Installation

This notebook uses Python 3.6.

  1. Install required python packages with:
pip install -r requirements.txt
  1. Run the post install script.
bash postBuild
  1. Launch Jupyter Notebook to open the notebook titled Single Cell RNA-seq Clustering Analysis.ipynb