Pinned Repositories
Application_Materials_For_PhD
This repository contains my CV, personal statement, writing samples, transcripts, test scores, research&work experiences, etc.
awesome-research-proposals-guide
A guide to improve your research proposals.
Best-websites-a-programmer-should-visit
:link: Some useful websites for programmers.
beta-lactamase
boss_zhipin
a script for collecting all job information
DataScienceResources
List of Books, Courses and other material for Data Science which I found useful
How-To-Ask-Questions-The-Smart-Way
本文原文由知名 Hacker Eric S. Raymond 所撰寫，教你如何正確的提出技術問題並獲得你滿意的答案。
PDB_cleaner
A Python 3 script for cleaning up the PDB file
PhD-Application-2014
All my documents related to PhD application to ten universities in the US
Whole_Transcriptome_Paper
wangdepin's Repositories
wangdepin/30-Days-Of-Python
30 days of Python programming challenge is a step-by-step guide to learn the Python programming language in 30 days. This challenge may take more than100 days, follow your own pace.
wangdepin/Alternative-Splicing-Tools
A list of alternative splicing analysis resources
wangdepin/annotated_deep_learning_paper_implementations
🧑🏫 59 Implementations/tutorials of deep learning papers with side-by-side notes 📝; including transformers (original, xl, switch, feedback, vit, ...), optimizers (adam, adabelief, ...), gans(cyclegan, stylegan2, ...), 🎮 reinforcement learning (ppo, dqn), capsnet, distillation, ... 🧠
wangdepin/AS_project
wangdepin/Awesome-pytorch-list
A comprehensive list of pytorch related content on github,such as different models,implementations,helper libraries,tutorials etc.
wangdepin/BI-BE-CS-183-2023
Introduction to Computational Biology and Bioinformatics Course at Caltech, 2023
wangdepin/bioinformatics-conf-vids
List of conferences with talk videos posted online
wangdepin/cactus_20230515
Chromatin ACcessibility and Transcriptomics Uniting Software
wangdepin/CamoTSS
Detection and couting alternative TSS in single cells
wangdepin/d2l-en
Interactive deep learning book with multi-framework code, math, and discussions. Adopted at 400 universities from 60 countries including Stanford, MIT, Harvard, and Cambridge.
wangdepin/GitHubPoster
Make everything a GitHub svg poster and Skyline!
wangdepin/hexo-theme-sungod
一款定制化的Hexo博客主题
wangdepin/jobposting-bioinformatics
wangdepin/lambo
Code to reproduce experiments in "Accelerating Bayesian Optimization for Protein Design with Denoising Autoencoders" (Stanton et al 2022)
wangdepin/learngenomics.dev
A guided, intuitive introduction to genomics for software engineers. Curated by the community.
wangdepin/MARVEL
wangdepin/MethylMix
Identification of differentially methylated genes in biomedical data
wangdepin/OntoProtein
Code and datasets for the ICLR2022 paper "OntoProtein: Protein Pretraining With Gene Ontology Embedding"
wangdepin/openfold
Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2
wangdepin/opensource-patent-analytics
patent analysis
wangdepin/pycounts
wangdepin/python-mastery
Advanced Python Mastery (course by @dabeaz)
wangdepin/rnaseq-pipeline
RNA-seq pipeline for raw sequence alignment and transcript/gene quantification.
wangdepin/samplemod
wangdepin/splicekit
splicekit: an integrative toolkit for splicing analysis from short-read RNA-seq
wangdepin/STARsolo
wrapper scripts for convenient STARsolo processing of 10X and other scRNA-seq
wangdepin/trackplot
trackplot is a tool for visualizing various next-generation sequencing (NGS) data, including DNA-seq, RNA-seq, single-cell RNA-seq and full-length sequencing datasets.
wangdepin/wangdepin
wangdepin/wangdepin.github.io
wangdepin/wingmanAI
WingmanAI provides real-time transcription of audio, integrated with ChatGPT for interactive use. It allows users to save, load, and append transcripts for effective context management in conversations.