wanglinxiao

wanglinxiao's Stars

• bulik/ldsc

  LD Score Regression (LDSC)

  Language:Python634342

• CostaLab/reg-gen

  Regulatory Genomics Toolbox: Python library and set of tools for the integrative analysis of high throughput regulatory genomics data.

  Language:Python10330

• gexijin/shinygo

  Language:R2010

• tanghaibao/goatools

  Python library to handle Gene Ontology (GO) terms

  Language:Python771211

• CshlSiepelLab/FitCons2

  Language:C++11

• CBIIT/LDlinkR

  LDlinkR

  Language:R5410

• FunctionLab/sei-manuscript

  Code for reproducing the Sei manuscript results

  Language:Jupyter Notebook153

• kircherlab/CADD-scripts

  CADD scripts release for offline scoring. For more information about CADD, please visit our website

  Language:Python6832

• csglab/MoSBAT

  Motif Similarity Based on Affinity of Targets

  Language:HTML13

• CshlSiepelLab/LINSIGHT

  Language:C++249

• ImSoErgodic/py-upset

  A pure-python implementation of the UpSet suite of visualisation methods by Lex, Gehlenborg et al.

  Language:Python31357

• MindAI/kmer

  A Python code for generating k-mer features for a set of DNA/ genomic sequences.

  Language:Python2818

• LankyCyril/pyvenn

  Python module for plotting Venn diagrams of 2..6 sets

  Language:Jupyter Notebook12027

• FunctionLab/sei-framework

  code to run sei and obtain sei and sequence class predictions

  Language:Python906

• ZongxianLee/MMD_Loss.Pytorch

  A pytorch implementation of Maximum Mean Discrepancies(MMD) loss

  Language:Python19568

• ENCODE-DCC/atac-seq-pipeline

  ENCODE ATAC-seq pipeline

  Language:Python383172

• libuyu/mmdetection

  Open MMLab Detection Toolbox with PyTorch

  Language:Python3416

• getaurora/download

  极光官方版本下载页 翻墙 代理 科学上网 外网 加速器 梯子 路由

  3.7k456

• mdshw5/pyfaidx

  Efficient pythonic random access to fasta subsequences

  Language:Python45175

• crazyhottommy/ChIP-seq-analysis

  ChIP-seq analysis notes from Ming Tang

  Language:Python741294

• guma44/GEOparse

  Python library to access Gene Expression Omnibus Database (GEO)

  Language:Jupyter Notebook13951

• konstantint/matplotlib-venn

  Area-weighted venn-diagrams for Python/matplotlib

  Language:Jupyter Notebook50868

• broadinstitute/picard

  A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.

  Language:Java973370

• iioSnail/chaotic-transformer-tutorials

  Language:Jupyter Notebook10813

• jindongwang/transferlearning

  Transfer learning / domain adaptation / domain generalization / multi-task learning etc. Papers, codes, datasets, applications, tutorials.-迁移学习

  Language:Python13.3k3.8k

• seqcode/cross-species-domain-adaptation

  Codebase for the domain adaptation (cross-species TF binding prediction) project.

  Language:Jupyter Notebook116

• medvedevgroup/SibeliaZ

  A fast whole-genome aligner based on de Bruijn graphs

  Language:C++14019

• multiz/multiz

  DNA multiple sequence aligner, official version from Penn State's Miller Lab

  Language:C316

• seenstevo/Four-fold_degenerate_bedmaker

  A python script to identify four-fold degenerate sites from a CDS fasta

  Language:Python72

• daler/pybedtools

  Python wrapper -- and more -- for BEDTools (bioinformatics tools for "genome arithmetic")

  Language:Python302102