/CanopyClustering

Canopy clustering analysis base on the abundance profile of unique metagenomic gene set

Primary LanguagePerl

CanopyClustering

Canopy clustering analysis base on the abundance profile of unique metagenomic gene set

  • Perl script for co-abundance genes or groups caculation. Reference article is Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes.

  • Dependent modules:

    Cwd

    POSIX

    List::Util

    Getopt::Long

    Statistics::Basic

    Statistics::RankCorrelation