/SeqCor

Primary LanguageC++

SeqCor

Compile

  • Linux: g++
g++ SeqCor.cpp -o SeqCor -O3 -Wall -fopenmp -msse2

Usage

Optional parameters

chmod +x SeqCor
./SeqCor

Usage: grna [options] grna input output

  • -g: covariant default=NULL
  • -d: 2^dims dimensions default=9
  • -t: trees default=896
  • -m: mtry default=2
  • -l: leaf default=cbrt(N)

Example

SeqCor gRNA.txt input.txt output.txt

gRNA.txt	input.txt	73151
signal is NOT adjusted by gene
dims	512
trees	896
mtry	2
leaf	11

Contacts

For questions, request and bug reports, please contact: wangyi_fudan@fudan.edu.cn