wanjauk

BOSS22

Bioinformatics Hub of Kenya Conference, 26-29 April 2022

breast_cancer_ctc

An RNA-Seq data analysis pipeline tutorial to reprocess data for breast cancer circulating tumor cells (CTC) from a recent study (PMID: 29868978)

CDR3_physicochem_analysis

Analyze the physicochemical properties of recovered VDJ sequences

Data-mining

Data mining to discover trends in Open Science in Kenya

eupathdb-organismdb

Scripts to help automate the process of generator Bioconductor OrgDb, TranscriptDb, and OrganismDb packages for species hosted on EuPathDB

getting-started-with-open-source

intbt_2019

Training material for H3ABioNet 16S rRNA Microbiome Intermediate Bioinformatics Training 2019

intbt_2020

Training material for H3ABioNet 16S rRNA Microbiome Intermediate Bioinformatics Training 2020

Introduction_to_Linux

Linux introduction

tbrucei_gcn

Code used in the analysis pipeline of T. brucei Gene Co-expression Network study

wanjauk/tbrucei_gcn

Code used in the analysis pipeline of T. brucei Gene Co-expression Network study

wanjauk/BOSS22

Bioinformatics Hub of Kenya Conference, 26-29 April 2022

wanjauk/breast_cancer_ctc

An RNA-Seq data analysis pipeline tutorial to reprocess data for breast cancer circulating tumor cells (CTC) from a recent study (PMID: 29868978)

wanjauk/CDR3_physicochem_analysis

Analyze the physicochemical properties of recovered VDJ sequences

wanjauk/Data-mining

Data mining to discover trends in Open Science in Kenya

wanjauk/eupathdb-organismdb

Scripts to help automate the process of generator Bioconductor OrgDb, TranscriptDb, and OrganismDb packages for species hosted on EuPathDB

wanjauk/getting-started-with-open-source

wanjauk/intbt_2019

Training material for H3ABioNet 16S rRNA Microbiome Intermediate Bioinformatics Training 2019

wanjauk/intbt_2020

Training material for H3ABioNet 16S rRNA Microbiome Intermediate Bioinformatics Training 2020

wanjauk/Introduction_to_Linux

Linux introduction

wanjauk/LandMacharia

Class assignment on the analysis of epidemiological data

wanjauk/learning_git

This repository is for learning git and github (beginner level)

wanjauk/learning_nextflow

Tutorial on how to use nextflow to create a workflow for blast

wanjauk/manuscript-shared-rnaseq

R and Rmarkdown code used across multiple RNA-Seq projects.

wanjauk/Mount-Kenya-University-Bioinformatics-workshop-2022

A repository with data, scripts and results of the 1st Bioinformatics MKU workshop

wanjauk/MyFirstFork

Fork this repository and make changes to the README

wanjauk/new_project

Template for a reproducible project's directory organization from SchlossLab

wanjauk/OpenScience_in_Africa

BOSS mini project on evaluating the current status of open science in Africa

wanjauk/org.Tb927.tritryp.db

Genome-wide annotation package for Trypanosoma brucei brucei TREU927

wanjauk/python-intermediate-inflammation

Learning python during the 'Research Software Camp: Next steps in coding' event organized by the Software Sustainability Institute

wanjauk/ReproducibleResearchRStudio

This is a basic introductory course material prepared for the Open Science Workshop, Nairobi.

wanjauk/sars-cov-2-genomics-and-bioinformatics-2024

An open-source project for creating online courses, built by P2PU

wanjauk/solving_rosalind_problems

Documentation of my solutions to Rosalind bioinformatics problems available at https://rosalind.info/problems/locations/

wanjauk/Status-of-OpenScienceKE-LiteratureSearch

Scan online literature databases for status of Open Science in Kenya

wanjauk/taxonomizr

Parse NCBI taxonomy and accessions to find taxonomix assignments

wanjauk/TeachingJupyterNotebooks

Training materials for the Open Science Workshop held in Nariobi

wanjauk/testing

Test Repo - Open Science Training

wanjauk/Trypanosoma.brucei.TREU927

Genome-wide annotation package for Trypanosoma brucei brucei TREU927

wanjauk/TxDb.TbruceiTREU927.tritryp43.genes

Transcript annotation package for Trypanosoma brucei brucei TREU927