A collection of codes for daily analysis of freeze synchrony.
Features
- Read the original [video_file_name].csv file to generate summary.csv
- Compute %freezing, %overlap, freeze bout, the averaged duration
- Drop dyads of either member with zero freezing
- Compute Cohen_D (Single processing version)
- Markov chain analysis
Caution
- Currently, only for inter the lab usage. No support for public.
Supposed miniconda and ffmpeg are already installed.
- Python environment
conda update -n base -c defaults conda`
conda create --name jl3
conda activate jl3
conda install python=3.9 anaconda
pip install opencv-contrib-python
pip install ffmpeg-python
- Download the code and run the notebook files.