wdecoster/nanolyse

Not working with pip3??

Closed this issue · 8 comments

NanoLyse commands don't seem to run with pip3. Not even NanoLyse -h, NanoLyse --help or NanoLyse -v gives me feedback...

(note: I installed using "pip3 install NanoLyse" instead of "pip install NanoLyse" like mentioned in the code description

I installed using "pip3 install NanoLyse"

Did the installation return any errors?

Not even NanoLyse -h, NanoLyse --help or NanoLyse -v gives me feedback...

Just nothing happens or do you get an error?

I get an error that says NanoLyse: command not found

Please repeat the installation and show me the output of pip(3).

So installation was succesful, but the directory to which pip3 installs is not in your $PATH. I don't think this is a problem with NanoLyse, but rather with your setup.

Please try find / -name NanoLyse

Here is what I get when I try the command you mentioned:
Screenshot from 2020-06-06 12-45-12

If we ignore all lines with "permission denied" you'll see that NanoLyse was installed in /home/fujr/.local/bin/. Please see if that directory is in $PATH and if not, add it. After restarting your terminal NanoLyse should then just work. See also What is $PATH.

Note that is basic Linux and not related specifically to NanoLyse. You would probably benefit from following some tutorials about the introduction to the command line.