BirdDetector

A global bird detector model for the deepforest package. This repo recreates the analysis for the manuscript.

Getting Started

Here is a colab tutorial that demonstrates the basic package workflow.

https://colab.research.google.com/drive/1e9_pZM0n_v3MkZpSjVRjm55-LuCE2IYE?usp=sharing

Environment

In a clean conda env.

pip install deepforest

Data

Where possible we have released data to make a 'machine learning ready' dataset. See the zenodo archive. Each dataset was zipped into an archive. Each contains images and two .csv files one for train and one for test.

Everglades Models

Bird Detector

The everglades data was annotated on Zooniverse and parsed using the utilities in the EvergladesWadingBird Zooniverse repo. This repo starts after the data have been downloaded and split into training/test using this script. The everglades.py script creates a comet experiment.