Pinned Repositories
16S_copy_num_normalize
Normalize sequences by 16S rRNA gene copy number based on rrnDB database.
Amplicon-Analysis
awesome-network-analysis
A curated list of awesome network analysis resources.
BEF-scaling-MA
BEF meta-analysis of b code and data
betalink
MIRROR - beta diversity of species interaction networks
Biodiversity
representativeness analyses
BioinfProtocols
Data for RAxML chapter in "Protocols in Bioinformatics"
blavaan
An R package for Bayesian structural equation modeling
chinaMapJsonData
about china map json data，各个省市县的json数据都在里面，最外面的datas.json是全国的
Co-expressionNetwork
Scripts and documentation of co-expression network analysis
weibokong27's Repositories
weibokong27/Doing-Meta-Analysis-in-R
All R code and source files for the online guide "Doing Meta-Analysis with R: A Hands-On Guide"
weibokong27/EasyMicroPlot
A easy R script plot for Microbiome analysis
weibokong27/forestmodel
weibokong27/Fungal-bacterial-network-construction-and-analysis
R code for analyses in the manuscript "Fungal-Bacterial Cooccurrence Patterns Differ between Arbuscular Mycorrhizal Fungi and Nonmycorrhizal Fungi across Soil Niches"
weibokong27/ggh4x
ggplot extension: options for tailored facets, multiple colourscales and miscellaneous
weibokong27/ggmsa
:traffic_light: Visualizing publication-quality multiple sequence alignment using ggplot2
weibokong27/Guideline-for-Computational-Biology-and-Bioinformatics
weibokong27/ITSoneDB_qiime
ITSoneDB release for the integration into the QIIME2 pipeline
weibokong27/KrakenTools
KrakenTools provides individual scripts to analyze Kraken/Kraken2/Bracken/KrakenUniq output files
weibokong27/lefse
weibokong27/MCycDB
weibokong27/meta-analysis_of_ecological_data
This is a repository for draft versions of a book called Meta-Analysis of Ecological Data in R (MaEDR)
weibokong27/meta-analysis_of_variance
This repository contains all R code and data used for a project on the use of meta-analysis of both means and variance in ecology and evolution.
weibokong27/metagenomic-analysis
weibokong27/microbiomeutilities
The is mostly a wrapper tool using phyloseq and microbiome R packages.
weibokong27/microclass
R package for microbial taxonomic classification
weibokong27/mmvec
Neural networks for microbe-metabolite interaction analysis
weibokong27/NEFI_microbe
weibokong27/Peru_GDM
GDM
weibokong27/qiime2
weibokong27/rcolors
270 colormaps in R
weibokong27/sheng-xin-xiao-bai-yu
历史文档备份（只包含2019年和2020年）
weibokong27/SpeciesPool
R Package to calculate plot-specific species pools using large vegetation databases
weibokong27/srdb
Global soil respiration database
weibokong27/stepFD
Shiny app for reproducible functional diversity analysis
weibokong27/Structural-Equation-Modeling-foR-Psychologists
Lesson files used in the Structural Equation Modeling for Psychologists - Practical Applications in R, taught at Ben-Gurion University on the Negev
weibokong27/vamb
Variational autoencoder for metagenomic binning
weibokong27/warming-network-complexity-stability
Computer code for the manuscript "Climate Warming Enhances Microbial Network Complexity and Stability"
weibokong27/WordPressFiles
weibokong27/Workshop_THU
For THUers of YangLab.