/puffsAnalysis

Automated analysis of "puffs" receptor recycling movies, based on Danuser lab's cmeAnalysis code.

Primary LanguageJupyter NotebookGNU General Public License v3.0GPL-3.0

Analysis package for evaluating TIR-FM movies of GPCR recycling. Primarily based on detection and tracking code in cmeAnalysis (originally published in Aguet et al. 2013 and available from the Danuser Lab or in a modified form here).

Classification requires the following Python packages (all available from pip):

  • numpy
  • scipy
  • sklearn
  • h5py
  • matplotlib

Copyright © T. Phan & Z. Weinberg 2016