Pinned Repositories
Bandage
a Bioinformatics Application for Navigating De novo Assembly Graphs Easily
BioContainers
Bioinformatics containers
docker-code-server
fastz-release
proof of concept integration of FastZ with LASTZ
flocker-driver
hic-pipeline
HiC uniform processing pipeline
Juicebox
Visualization and analysis software for Hi-C data -
juicer
A One-Click System for Analyzing Loop-Resolution Hi-C Experiments
pawsey-containers
A collection of Dockerfiles and Singularity deffiles for Pawsey-supported images
proxmox-hacks
weiszd's Repositories
weiszd/Bandage
a Bioinformatics Application for Navigating De novo Assembly Graphs Easily
weiszd/BioContainers
Bioinformatics containers
weiszd/docker-code-server
weiszd/fastz-release
proof of concept integration of FastZ with LASTZ
weiszd/flocker-driver
weiszd/hic-pipeline
HiC uniform processing pipeline
weiszd/Juicebox
Visualization and analysis software for Hi-C data -
weiszd/juicer
A One-Click System for Analyzing Loop-Resolution Hi-C Experiments
weiszd/pawsey-containers
A collection of Dockerfiles and Singularity deffiles for Pawsey-supported images
weiszd/proxmox-hacks
weiszd/SegAlign
A Scalable GPU-Based Whole Genome Aligner, published in SC20: https://doi.ieeecomputersociety.org/10.1109/SC41405.2020.00043
weiszd/slurm-docker-cluster
A Slurm cluster using docker-compose
weiszd/straw
Extract data quickly from Juicebox via straw
weiszd/terminator
multiple GNOME terminals in one window
weiszd/TOGA
TOGA (Tool to infer Orthologs from Genome Alignments): implements a novel paradigm to infer orthologous genes. TOGA integrates gene annotation, inferring orthologs and classifying genes as intact or lost.
weiszd/tunnel-guacamole
[Mirror] Cloudflare Argo Tunnel with Apache Guacamole
weiszd/w2rap-contigger
An Illumina PE genome contig assembler, can handle large (17Gbp) complex (hexaploid) genomes.
weiszd/winutil
Chris Titus Tech's Windows Utility - Install Programs, Tweaks, Fixes, and Updates