Pinned Repositories
bcbio-nextgen
Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis
bfx-tools-wdl
WDL tasks for commonly used BFX tools
CytoMethIC
cyvcf2
cython + htslib == fast VCF and BCF processing
deap
Distributed Evolutionary Algorithms in Python
feat
A feature engineering automation tool for learning data representations
HIBACHI_ML
tiny_gp
Tiny Genetic Programming in Python
tpot
A Python tool that automatically creates and optimizes machine learning pipelines using genetic programming.
weixuanfu's Repositories
weixuanfu/tpot
A Python tool that automatically creates and optimizes machine learning pipelines using genetic programming.
weixuanfu/tiny_gp
Tiny Genetic Programming in Python
weixuanfu/bcbio-nextgen
Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis
weixuanfu/bfx-tools-wdl
WDL tasks for commonly used BFX tools
weixuanfu/CytoMethIC
weixuanfu/cyvcf2
cython + htslib == fast VCF and BCF processing
weixuanfu/deap
Distributed Evolutionary Algorithms in Python
weixuanfu/feat
A feature engineering automation tool for learning data representations
weixuanfu/HIBACHI_ML
weixuanfu/LPC
Documentation and informational resources for LPC use
weixuanfu/mnp_training
DNA methylation-based classification of central nervous system tumours
weixuanfu/MuPeXI
MuPeXI: the mutant peptide extractor and informer, a tool for predicting neo-epitopes from tumor sequencing data.
weixuanfu/penn-ml-benchmarks
A large, curated repository of benchmarks for evaluating supervised machine learning algorithms.
weixuanfu/pennai
the Penn AI engine.
weixuanfu/plasmodium-falciparum
Malaria DREAM sub-challenge 2 write-up
weixuanfu/psb-manuscript
Manuscript source for the People of the Pacific Symposium on Biocomputing
weixuanfu/pVAC-Seq
This tools has been superseded by https://github.com/griffithlab/pVACtools
weixuanfu/ReBATE
Relief Based Algorithms of ReBATE implemented in Python with Cython optimization.
weixuanfu/scikit-learn
scikit-learn: machine learning in Python
weixuanfu/scikit-mdr
A sklearn-compatible Python implementation of Multifactor Dimensionality Reduction (MDR) for feature construction.
weixuanfu/scikit-rebate
A scikit-learn-compatible Python implementation of ReBATE, a suite of Relief-based feature selection algorithms for Machine Learning.
weixuanfu/spark-sklearn
Scikit-learn integration package for Spark
weixuanfu/staged-recipes
A place to submit conda recipes before they become fully fledged conda-forge feedstocks
weixuanfu/stanford-cs-229-machine-learning
VIP cheatsheets for Stanford's CS 229 Machine Learning
weixuanfu/tensorflow
Computation using data flow graphs for scalable machine learning
weixuanfu/tpot-ds-ms
Manuscript for tpot-ds
weixuanfu/vimrc
The ultimate Vim configuration: vimrc