W. Evan Johnson Lab
This is the main GitHub home for the research and software projects from Evan Johnson's Lab
United States of America
Pinned Repositories
animalcules
R shiny app for interactive microbiome analysis
ASSIGN
Adaptive Signature Selection and InteGratioN
BatchQC
Batch Effects Quality Control Software
curatedTBData
Curation of existing TB gene expression datasets
curatedTBExplorer
This is the repository for the curatedTBExplorer shiny interface to view and analyze the curatedTBData
LegATo
An R-based Longitudinal mEtaGenomic Analysis Toolkit for microbiome data
materials
MetaScope
An R-based approach for preprocessing and aligning 16S, metagenomic, and metatranscriptomic data (PathoScope version 3.0)
PathoStat
The purpose of this package is to perform Statistical Analysis on the PathoScope generated reports files.
TBSignatureProfiler
Profile RNA-seq data using published TB gene signatures
W. Evan Johnson Lab's Repositories
wejlab/animalcules
R shiny app for interactive microbiome analysis
wejlab/MetaScope
An R-based approach for preprocessing and aligning 16S, metagenomic, and metatranscriptomic data (PathoScope version 3.0)
wejlab/TBSignatureProfiler
Profile RNA-seq data using published TB gene signatures
wejlab/BatchQC
Batch Effects Quality Control Software
wejlab/ASSIGN
Adaptive Signature Selection and InteGratioN
wejlab/PathoStat
The purpose of this package is to perform Statistical Analysis on the PathoScope generated reports files.
wejlab/curatedTBData
Curation of existing TB gene expression datasets
wejlab/curatedTBExplorer
This is the repository for the curatedTBExplorer shiny interface to view and analyze the curatedTBData
wejlab/LegATo
An R-based Longitudinal mEtaGenomic Analysis Toolkit for microbiome data
wejlab/materials
wejlab/TBSignatureProfiler-docs
A repository to host the files for the TBSignatureProfiler website.
wejlab/wejlab.github.io
Repository for wejlab.github.io
wejlab/animalcules-docs
wejlab/curatedTBExplorer-docs
Documentation for the curatedTBExplorer
wejlab/LegATo-docs
Docs for the LegATo website
wejlab/metascope-docs
Repository holding documents for the MetaScope website
wejlab/sctk_docs
Documentation Source for singleCellTK
wejlab/singleCellTK
Interactively Analyze scRNA-Seq Data