/sirna

Primary LanguagePerlMIT LicenseMIT

siRNA selection program from the Whitehead Institute

This repo contains the key files from the siRNA selection program at https://sirna.wi.mit.edu/

The webserver requires

  • PHP (and the mysql API)
  • JavaScript
  • Perl (including BioPerl, log4perl, Email:Valid and the mysql API)
  • MySQL
  • NCBI BLAST executable 'blastall'
  • mysql php API
  • mysql perl API

We adopted this Apache directory structure:

  • www/ as the document root and some executable scripts
  • cgi-bin/ for the main executable scripts

Note: you need to create a siRNAext directory under www/ and cgi-bin/, and copy the github files under the corresponding siRNAext sub-folder.