williamdlees

mastodon: @williamlees@ioc.exchange

Birkbeck, University of LondonLondon

Pinned Repositories

AmberUtils
Utilities to assist with Amber Molecular Dynamics structure preparation and MMPBSA.py energy methods
Language:Python2013
digby
Language:JavaScript00
digby_backend
Language:Python0 1 03
digby_data
Language:Python01
digger
Language:HTML4 1 00
IgLabel
Manage allocation of temporary labels for IG alleles
Language:Python2 1 00
receptor_utils
Misc utilities for receptor gene sequences
Language:Python2 1 23
TRIgS
A collection of bioinformatics tools for sequence analysis, with an emphasis on Next-Generation Sequencing and Rep-Seq.
Language:Python8 3 03
vdjbasevis
Language:R1 1 00

williamdlees's Repositories

williamdlees/AmberUtils
Utilities to assist with Amber Molecular Dynamics structure preparation and MMPBSA.py energy methods
Language:Python2013
williamdlees/TRIgS
A collection of bioinformatics tools for sequence analysis, with an emphasis on Next-Generation Sequencing and Rep-Seq.
Language:Python8 3 03
williamdlees/digger
Language:HTML4 1 00
williamdlees/IgLabel
Manage allocation of temporary labels for IG alleles
Language:Python2 1 00
williamdlees/receptor_utils
Misc utilities for receptor gene sequences
Language:Python2 1 23
williamdlees/vdjbasevis
Language:R1 1 00
williamdlees/digby
Language:JavaScript00
williamdlees/digby_backend
Language:Python0 1 03
williamdlees/digby_data
Language:Python01
williamdlees/digby_docker
Language:JavaScript1 01
williamdlees/digby_infra
Language:Shell
williamdlees/dn_annotate
Language:Nextflow
williamdlees/flairr_dsl2
Language:HTML
williamdlees/FLAIRRSeq
williamdlees/flask_table
Because writing HTML is fiddly and all of your tables are basically the same
williamdlees/gldb-website
strawman static website for gldb
Language:CSS1 0
williamdlees/igenotyper_plots
IGenotyper reports and statistics
Language:Python
williamdlees/igv
Fork of igv with custom changes for vdjbase
Language:JavaScript
williamdlees/immune_receptor_genomics
williamdlees/ir_to_vdj
Parse iReceptor metadata and convert to VDJbase format
Language:Python
williamdlees/python-Levenshtein
The Levenshtein Python C extension module contains functions for fast computation of Levenshtein distance and string similarity
Language:C1 0
williamdlees/SEARCH-D
An algorithm for de novo finding IGHD genes in IGH locus
Language:Python
williamdlees/software-wg
1 0
williamdlees/vdjbase_docker
Language:Dockerfile1 0
williamdlees/viafoundry
A graphical user interface for distributed data processing of high throughput genomics
williamdlees/williamdlees