wilsonte-umich
Professor, Departments of Pathology, Human Genetics, Center for Computational Medicine and Bioinformatics, Faculty Director, Advanced Genomics Core
University of MichiganAnn Arbor, MI
Pinned Repositories
aws-shiny-server
Easily host an R Shiny web app from an AWS server instance
genomex-mdi-tools
Shared MDI tools, modules, environments, and options for pipelines and apps that perform genomic data analysis
linCNV
Pipeline to examine 10x scCNV Cell Ranger output for CNVs and cell lineage, with visualization tools
mdi
Linux server installation utility for the Michigan Data Interface
mdi-apps-framework
Stage 2 applications framework for the Michigan Data Interface
mdi-basic-training
Tutorials to build essential skills for participating in Michigan Data Interface code development.
mdi-desktop-app
Electron launcher app for the Michigan Data Interface apps framework
mdi-manager
R package with management functions (install, run, ...) for the Michigan Data Interface
umich-labs
Jekyll theme for research laboratory/project websites
wilsonte-umich.github.io
Website for projects led by Thomas E. Wilson, Professor, University of Michigan Medical School
wilsonte-umich's Repositories
wilsonte-umich/umich-labs
Jekyll theme for research laboratory/project websites
wilsonte-umich/wilsonte-umich.github.io
Website for projects led by Thomas E. Wilson, Professor, University of Michigan Medical School
wilsonte-umich/aws-shiny-server
Easily host an R Shiny web app from an AWS server instance
wilsonte-umich/genomex-mdi-tools
Shared MDI tools, modules, environments, and options for pipelines and apps that perform genomic data analysis
wilsonte-umich/linCNV
Pipeline to examine 10x scCNV Cell Ranger output for CNVs and cell lineage, with visualization tools
wilsonte-umich/mdi
Linux server installation utility for the Michigan Data Interface
wilsonte-umich/mdi-apps-framework
Stage 2 applications framework for the Michigan Data Interface
wilsonte-umich/mdi-basic-training
Tutorials to build essential skills for participating in Michigan Data Interface code development.
wilsonte-umich/mdi-desktop-app
Electron launcher app for the Michigan Data Interface apps framework
wilsonte-umich/mdi-manager
R package with management functions (install, run, ...) for the Michigan Data Interface
wilsonte-umich/mdi-pipelines-framework
Stage 1 pipelines framework for the Michigan Data Interface
wilsonte-umich/mdi-suite-template
Repository template to create a tools suite for the Michigan Data Interface (for tool developers)
wilsonte-umich/mibrowser-file-manager
Utility to transfer data files from a cluster server to the MIBrowser AWS S3 bucket
wilsonte-umich/midataint.github.io
Project-level documentation for the Michigan Data Interface
wilsonte-umich/msvtools
suite for finding de novo copy number variants (CNVs) in genomic microarray data
wilsonte-umich/ont-mdi-tools
Generalized tools for processing Oxford nanopore read data, basecalling, POD5 file manipulation, modeling, etc.
wilsonte-umich/q-pipeline-manager
wilsonte-umich/resection-seq
Script and reference files required to run the resection sequencing pipeline of Bazzano et al 2021.
wilsonte-umich/svtools
suite for finding copy number variants (CNVs) and structural variants (SVs) in next generation sequencing data
wilsonte-umich/svx-mdi-tools
MDI pipelines and apps for genome structural variant analysis by different library strategies
wilsonte-umich/umich-labs-template
Template for starting a research lab or project web site using the umich-labs Jekyll theme.
wilsonte-umich/wilsonte-umich
Config files for my GitHub profile.