remotes::install_github('wilsontom/gaml2r')Then to open a GAML file simply use the open_file function;
myData <- gaml2r::openFile('my_file.gaml', output = 'list', include_injection_info = FALSE)Using output = 'list' will return a list for each sample, where output = 'tbl_df' then all the data is returned in long format, as a tibble.
If the gaml file has been created using custom export options (to include the sample injection properties), then specifying include_injection_info = TRUE will output these values alongside the exported data.
The SHA1 Integrity Algorithm for a GAML file can be retrieved using the following function;
SHA1 <- gaml2r::get_sha1('my_file.gaml') Details on the GAML conversion parameters can be retrieved using the get_parameters function.
GAML_Params <- gaml2r::get_parameters('my_file.gaml')