Allow manual naming of mitochondrial genes
Closed this issue · 2 comments
wmacnair commented
"It would be great for the user to have a parameter or something to add the names of the mitochondrial genes to make_qc_dt manually. She had mouse samples and just got a warning that no human mitochondrial genes were detected in the first step."
@mluetge in case you want add anything
wmacnair commented
My own thoughts:
I'm still undecided on whether I should put effort into a function for calculating QC metrics quickly, as scater
already does this. I'll consider it if enough people find the scater
function slow for v large datasets, or there's some other reason.
wmacnair commented
Closing as I'm going to steal the QC metric functionality from scater