wolverinelei

wolverinelei's Stars

• OpenGene/fastplong

  Ultra-fast preprocessing and quality control for long-read sequencing data

  Language:C++293

• OpenGene/fastp

  An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)

  Language:C++1.9k333

• WGLab/doc-ANNOVAR

  Documentation for the ANNOVAR software

  232353

• kcleal/gw

  Genome browser and variant annotation

  Language:C++2757

• tallulandrews/LiverMap2.0

  Language:R142

• XSLiuLab/Workshop

  课题组每周研讨会

  Language:HTML17448

• Starlitnightly/omicverse-reproducibility

  Reproducibility of results/figures from omicverse paper

  Language:Python55

• youqiongye/CRC_scRNAseq

  Language:R4123

• jalon9358/LianLab_CRCLM

  Language:R111

• rnabioco/raer

  Characterize A-to-I RNA editing in bulk and single-cell RNA sequencing experiments

  Language:R72

• zhqingit/giremi

  GIREMI is a method that can identify RNA editing sites using one RNA-seq data set without requiring genome sequence data.

  Language:R4215

• gxiaolab/RNA_editing

  Language:Python32

• kasperlab/Gallini_et_al_2023_Nature

  Single-cell RNA-seq analysis notebooks for Gallini et al 2023 Nature publication

  Language:Jupyter Notebook5

• owkin/PyDESeq2

  A Python implementation of the DESeq2 pipeline for bulk RNA-seq DEA.

  Language:Python58361

• ETH-NEXUS/scAmpi_single_cell_RNA

  Code related to scRNA analysis using the scAmpi workflow

  Language:R248

• kidsneuro-lab/SpliceVault_figures

  Language:R2

• lindenb/jvarkit

  Java utilities for Bioinformatics

  Language:Java482133

• hzyao/merge_TCGA_GTEx

  Language:R103

• Zaoqu-Liu/BioEnricher

  Integrate Analysis and Visualization for Bioinformatic Enrichment Analyzer

  Language:HTML697

• AUTOMATIC1111/stable-diffusion-webui

  Stable Diffusion web UI

  Language:Python141k26.7k

• ratschlab/pancanatlas_code_public

  Public repository containing research code for the TCGA PanCanAtlas Splicing project

  Language:Python4116

• Python-World/python-mini-projects

  A collection of simple python mini projects to enhance your python skills

  Language:Python14.8k4.8k

• crazyhottommy/RNA-seq-analysis

  RNAseq analysis notes from Ming Tang

  Language:Python888295

• Ckend/scihub-cn

  国内环境下可用的scihub论文下载器

  Language:Python35775

• kangvcar/InfoSpider

  INFO-SPIDER 是一个集众多数据源于一身的爬虫工具箱🧰，旨在安全快捷的帮助用户拿回自己的数据，工具代码开源，流程透明。支持数据源包括GitHub、QQ邮箱、网易邮箱、阿里邮箱、新浪邮箱、Hotmail邮箱、Outlook邮箱、京东、淘宝、支付宝、**移动、**联通、**电信、知乎、哔哩哔哩、网易云音乐、QQ好友、QQ群、生成朋友圈相册、浏览器浏览历史、12306、博客园、CSDN博客、开源**博客、简书。

  Language:Python7.8k1.5k

• RegnerM2015/scENDO_scOVAR_2020

  This repository holds the scripts used to analyze the data presented in "A multi-omic single-cell landscape of human gynecologic malignancies", Regner et al., 2021

  Language:R327

• YuLab-SMU/enrichplot

  Visualization of Functional Enrichment Result

  Language:R22965

• TongjiZhanglab/ImSpiRE

  ImSpiRE is an Image features-aided Spatial Resolution Enhancement method for in situ capturing (ISC) datasets. It is written in Python 3.8 and requires CellProfiler 4.2.1. It is available as a command line tool, a Python library and a docker image to meet the needs of different users.

  Language:Python3

• DongqingSun96/STRIDE

  STRIDE (Spatial TRanscRIptomics DEconvolution by topic modelling) is a cell-type deconvolution tool for spatial transcriptomics by using single-cell transcriptomics data.

  Language:Python1710

• simoncmo/cytospace

  CytoSPACE: Optimal mapping of scRNA-seq data to spatial transcriptomics data

  Language:Python1