woodhaha

BuildingMachineLearningSystemsWithPython

Source Code for the book Machine Learning Systems with Python

chatgpt_academic

中科院科研工作专用ChatGPT，特别优化学术Paper润色体验，支持自定义快捷按钮，支持markdown表格显示，Tex公式双显示，代码显示功能完善，新增本地Python工程剖析功能/自我剖析功能

CRC_data_mining

Discover Diagnostic and Prognostic lncRNA Signatures in Patients with Colorectal Cancer Using Machine Learning Algorithms.

deepslide

Code for the Nature Scientific Reports paper "Pathologist-level classification of histologic patterns on resected lung adenocarcinoma slides with deep neural networks." A sliding window framework for classification of high resolution whole-slide images, often microscopy or histopathology images.

dl-keras-tf

rstudio::conf(2020) deep learning workshop

GenomicDataCommons

Provide R access to the NCI Genomic Data Commons portal.

HeatStarSeq_gh

A R/shiny web application to browse and compare public RNA-seq / ChIP-seq / CAGE datasets

labs

Rmd source files for the HarvardX series PH525x

PlotAppForTBtools

A shiny app for TBtools data plot

recharts

An R Interface to Baidu ECharts2 Library

woodhaha/GenomicDataCommons

Provide R access to the NCI Genomic Data Commons portal.

woodhaha/BIO465-Capstone-Project

Capstone Project for BIO 465. Research based on Gross et al. (2014). Finding significant interactions in breast cancer samples.

woodhaha/ChIPseeker

:dart:ChIP peak Annotation, Comparison and Visualization

woodhaha/clusterProfiler

:bar_chart:statistical analysis and visualization of functional profiles for genes and gene clusters

woodhaha/deep-review

A collaboratively written review paper on deep learning, genomics, and precision medicine

woodhaha/docker

woodhaha/docker-python

Kaggle Python docker image

woodhaha/dplyr

Dplyr: A grammar of data manipulation

woodhaha/echarts

A powerful, interactive charting and visualization library for browser

woodhaha/gephi

Gephi - The Open Graph Viz Platform

woodhaha/htmlwidgets

HTML Widgets for R

woodhaha/installr

Functions for installing softwares from within R

woodhaha/metafor

A Meta-Analysis Package for R

woodhaha/miRNA-cancer-classification

Gather and analyse miRNA data to design binary networks capable of recognising colorectal cancer versus healthy cells.

woodhaha/MultiAssayExperiment

R package(s) demonstrating management of multiassay data on a set of samples

woodhaha/mycancerrisk.io

An evidence-based tool for calculating your colorectal cancer risk

woodhaha/pathway-mapper

An interactive and collaborative graphical curation tool for cancer pathways

woodhaha/reproduce-cunha15canres

R/Bioconductor code to reproduce biostatistical analyses in Cunha15CanRes

woodhaha/reproduce-ma17jnci

R/Bioconductor code to reproduce the hypothesis-generating data analyses in Ma17JNCI

woodhaha/reticulate

R Interface to Python

woodhaha/rstan

RStan, the R interface to Stan

woodhaha/RTCGA

Download, integration and visualizations of the variety & volume of TCGA data.

woodhaha/sparklyr

R interface for Apache Spark

woodhaha/sql-server-samples

Official Microsoft GitHub Repository containing code samples for SQL Server

woodhaha/STAT545-UBC.github.io

Main repository for STAT 545 @ University of British Columbia, a course in data wrangling, exploration, and analysis with R.

woodhaha/tcgaAPP

working with TCGA data to direct investigation of genes

woodhaha/TCGAbiolinks

TCGAbiolinks

woodhaha/TCGAsurvival

Scripts to extract TCGA data for survival analysis

woodhaha/tensorflow-1

Computation using data flow graphs for scalable machine learning

woodhaha/xgboost

Scalable, Portable and Distributed Gradient Boosting (GBDT, GBRT or GBM) Library, for Python, R, Java, Scala, C++ and more. Runs on single machine, Hadoop, Spark, Flink and DataFlow