WORM: Water-Organic-Rock-Microbe Reaction Modeling
A free, open-source online workspace with ready-to-go thermodynamic modeling software
Pinned Repositories
AqEquil
AqEquil is a Python package that interfaces with aqueous speciation software EQ3/6. Quickly build and modify databases of thermodynamic data, perform batch aqueous speciation calculations, and view summarized reports of results.
AqOrg
A Python 3 package to estimate the thermodynamic properties and HKF parameters of aqueous organic molecules using second order group additivity methods.
Complicator
Estimate thermodynamic properties of aqueous inorganic complexes with monovalent ligands.
pyCHNOSZ
pyCHNOSZ is a Python 3 package that wraps the functionality of the package CHNOSZ for R. Perform thermodynamic calculations for aqueous geochemistry and biogeochemistry. Results are returned as tables and figures. Calculate standard state properties of molecules and reactions at elevated temperatures and pressures, create activity and predominance diagrams, and more.
WORM-db
Public repository for WORM databases
WORM-Figures
Repository for figures embedded in WORM-Library notebooks.
WORM-Library
Repository of WORM tutorials, tools, and databases.
WORM-Library-notebook
Code for downloading and distributing demo files through the WORM-Library notebook
WORM: Water-Organic-Rock-Microbe Reaction Modeling's Repositories
worm-portal/AqEquil
AqEquil is a Python package that interfaces with aqueous speciation software EQ3/6. Quickly build and modify databases of thermodynamic data, perform batch aqueous speciation calculations, and view summarized reports of results.
worm-portal/WORM-db
Public repository for WORM databases
worm-portal/pyCHNOSZ
pyCHNOSZ is a Python 3 package that wraps the functionality of the package CHNOSZ for R. Perform thermodynamic calculations for aqueous geochemistry and biogeochemistry. Results are returned as tables and figures. Calculate standard state properties of molecules and reactions at elevated temperatures and pressures, create activity and predominance diagrams, and more.
worm-portal/AqOrg
A Python 3 package to estimate the thermodynamic properties and HKF parameters of aqueous organic molecules using second order group additivity methods.
worm-portal/Complicator
Estimate thermodynamic properties of aqueous inorganic complexes with monovalent ligands.
worm-portal/WORM-Figures
Repository for figures embedded in WORM-Library notebooks.
worm-portal/WORM-Library
Repository of WORM tutorials, tools, and databases.
worm-portal/WORM-Library-notebook
Code for downloading and distributing demo files through the WORM-Library notebook
worm-portal/WORMutils
A python package for common functions used in other WORM codes.