wowfee

wowfee's Stars

• huawei-noah/HEBO

  Bayesian optimisation & Reinforcement Learning library developped by Huawei Noah's Ark Lab

  Language:Jupyter Notebook3.3k34049589

• stevencohn/OneMore

  A OneNote add-in with simple, yet powerful and useful features

  Language:C#2.6k441k218

• trevismd/statannotations

  add statistical significance annotations on seaborn plots. Further development of statannot, with bugfixes, new features, and a different API.

  Language:Python66168073

• fteufel/signalp-6.0

  Multi-class signal peptide prediction and structure decoding model.

  Language:Python8253115

• KyGao/ABGNN

  PyTorch code for KDD 2023 paper "Pre-training Antibody Language Models for Antigen-Specific Computational Antibody Design"

  Language:Python49364

• haddocking/haddock-tools

  Set of useful HADDOCK utility scripts

  Language:Python4621917

• gerdos/PyRAMA

  Python implementation of the Ramachandran plot

  Language:Python432411

• isayevlab/pKa-ANI

  Accurate prediction of protein pKa with representation learning

  Language:Python418610

• ifilot/edp

  Electron Density Plotter

  Language:C++33384

• alxdrcirilo/ramachandraw

  Ramachandran plotting tool

  Language:Python211510

• FoleyLab/MolecularDynamics

  Simple Molecular Dynamics code for Discovery-Driven approach to real gas properties.

  Language:Jupyter Notebook21209

• liedllab/surface_analyses

  Scores for Hydrophobicity and Charges based on SASAs

  Language:Python205124

• mit-ll/AlphaSeq_Antibody_Dataset

  Dataset with quantitative binding scores of scFv-format antibodies against SARS-CoV-2 target peptide

  20722

• oxpig/kasearch

  KA-Search: Rapid and exhaustive sequence identity search of known antibodies

  Language:Jupyter Notebook20105

• maxhebditch/abpred

  Language:Perl18214

• ibivu/hydrophobic_patches

  Language:Jupyter Notebook10711

• yjcyxky/antibody-dl

  A Collection of Platform, Tools, and Resources for Antibody Engineering

  Language:Python10102

• plijnzaad/quilt

  program to detect hydrophobic patches on protein surfaces

  Language:C8121

• Song-Liyang/abYsis-toolkit

  A toolkit to bulk-submission, download, analysis and summarizing data from abYsis.org

  Language:Python8100

• mummi-framework/mummi-ras

  Language:Python7452

• Hendejac/CpHMD-Analysis

  Language:Jupyter Notebook6214

• maxibor/meetdock

  Protein-Protein Docking software

  Language:Java6333

• gf712/MMGBSA

  Some code to extract data from Amber 15 MMGBSA.py output

  Language:Python4304

• AmeyaHarmalkar/therML

  The official repository for TherML - a machine learning approach to predict scFv and antibody thermostability

  Language:Python3150

• joethequant/docker_streamlit_antibody_protein_generation

  Docker streamlit antibody protein generation

  Language:Python30

• Tessier-Lab-UMich/PSERM_paper

  Language:Jupyter Notebook3001

• cneale-LANL/MuMMI-C21095

  Components for the MuMMI software release

  Language:Python2100

• multiplemonomials/cphstats

  Program to calculate statistics of protonation states from constant pH molecular dynamics simulations run by the Amber program suite

  Language:C++130

• NunoFBOliveira/CpHMD_v3

  Git commit of the new CpHMD version

  Language:Shell1100

• WhalleyT/SCASA

  Python module for the calculation of shape complementarity

  Language:Python10