Pinned Repositories
mNODE
McMLP
Trophic-model-of-human-microbiome
This a trophic model of human microbiome. It optimizes the nutrient intake of the gut to minimize the error between model predicted metagenome and experimentally measured metagenome. The metabolome is generated automatically from the trophic model without fitting to it.
auxotroph
ecological_niches
layer_decomposition_of_trophic_model
This is the repo that studies the biomass accumulation at different trophic layers
METRIC
This is the repo that contains the algorithm for using the gut microbial composition to correct nutrient profiles.
tongwang
ML_human_gut
COVID-19-waves-and-plateaus
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