/bioinform

Primary LanguageKotlin

README

Check releases for builds.

Requirements

  • java

How to run

./gradlew build
java -jar build/libs/bioinform-0.5.0.jar --help
java -jar build/libs/bioinform-0.5.0.jar --first configs/f1.fasta \
    --second configs/f2.fasta --gap-open -10 --gap-extend -1 --table \ 
    configs/blosum62.table --debug

Tests will be started automatically.

Important

One file should contain one FASTA item.