wvictor14's Stars
awesomedata/awesome-public-datasets
A topic-centric list of HQ open datasets.
git-tips/tips
Most commonly used git tips and tricks.
seandavi/awesome-single-cell
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
gkaramanis/tidytuesday
Code and plots for submissions to the #tidytuesday challenge
stemangiola/tidyseurat
Seurat meets tidyverse. The best of both worlds.
hansenlab/minfi
Devel repository for minfi
sjczheng/EpiDISH
This package contains a reference-based function to infer the proportions of a priori known cell subtypes present in a sample representing a mixture of such cell-types. Inference proceeds via one of 3 methods (Robust Partial Correlations-RPC, Cibersort (CBS), Constrained Projection (CP)), as determined by user.
minisciencegirl/studyGroup
UBC-STAT/stat545.stat.ubc.ca
Repository that produces the STAT 545 @ UBC website
brentp/450k-analysis-guide
A Practical (And Opinionated) Guide To Analyzing 450K Data
hhhh5/ewastools
A collection of functions for working with DNA methylation microarrays (quality control, pre-processing, LC estimation, ...)
stephaniehicks/methylCC
R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms
jepa/ubcdown
An rmarkdown template for preparing a PhD thesis at the University of British Columbia
glrs/10x-CellRanger-SJP
10xGenomics CellRanger - Slurm Job Partitioner (SJP)
Irrationone/graspods_scrnaseq_clustering_tutorial
Dimensionality reduction, clustering, and differential expression tutorial using single-cell RNA-seq data