/MPoxVR_dataset

MPox Virus sequence dataset

Primary LanguageJupyter Notebook

Monkey Pox Dataset

This dataset is downloaded from MPoxVR, which updated at 2023-08-19, contains two types of sequences:

  • Complete sequences: contains 1739 sequences, the avg length is 197135, max length is 210919, min length is 183230
  • Partial sequences: contains 4631 sequences, the avg length is 177921, max length is 228869, min length is 17
    • See anaysis_len.ipynb for more information of partial sequences.

Reference

[1] Ma Y, Chen M, Bao Y, et al. MPoxVR: A comprehensive genomic resource for monkeypox virus variant surveillance[J]. The Innovation, 2022, 3(5).