xfengnefx/hifiasm-meta

A serious error in simulated data

Closed this issue · 2 comments

[*** stack smashing detected ***]

When a data set have a high coverage, the error maybe appear. The software for simulation is pbsim2.

What's the target coverage? Could you post the log file (stderr)? I wonder where did this stack smashing happen..

Also for pbsim2, I think its default settings does not simulate hifi reads, is that correct?

What's the target coverage? Could you post the log file (stderr)? I wonder where did this stack smashing happen..

Also for pbsim2, I think its default settings does not simulate hifi reads, is that correct?
Sorry, It is my careless. There are many letter outside of [ATCG] in reference of simulation , such as Z, Y, H and so on. So,the program had this error. Now, the problem have been solved. Thank you.