xgrau/possvm-orthology
Possvm: find clusters of orthologs in phylogenies using species overlap & MCL
PythonGPL-3.0
Issues
- 6
Clustering problem
#20 opened by biowander - 4
Result of duplicated entries
#19 opened by biowander - 2
- 0
- 0
testing with permutation
#16 opened by xgrau - 1
testing issues
#17 opened by xgrau - 1
add option to omit printing of all pairs table
#13 opened by xgrau - 1
supports for reference annotations
#11 opened by xgrau - 0
multi-phylogeny parsing
#14 opened by xgrau - 0
do not print supports
#5 opened by xgrau - 0
mcl or components
#6 opened by xgrau - 2
collapse branches under X support
#8 opened by xgrau - 1
use branch lengths to define pre-MCL graph
#9 opened by xgrau - 0
update documentation
#4 opened by xgrau - 0
avoid splitting monophyletic clusters
#10 opened by xgrau - 1
multi sps ref
#7 opened by xgrau - 0
- 1
single gene tree
#1 opened by xgrau