xinformatics

tcr-esm

TransDTI

TransDTI: Transformer-based language models for estimating DTIs and building a drug-recommendation workflow

academicpages-mkdocs

Foss'23 spring learning

ai-healthcare

University of Arizona DataLab Workshop series on Advanced AI in Healthcare

AImedicinecoursera

My solution to the Ai for medicine specialization

alphafold

Open source code for AlphaFold to extract protein embeddings

deepinsight_py

Python implementation of the DeepInsight algorithm

DeepLncLoc

A deep learning-based lncRNA subcellular localization predictor

SurvCNN

SurvCNN: A Discrete Time-to-Event Cancer Survival Estimation Framework Using Image Representations of Omics Data

TransDTI

TransDTI: Transformer-based language models for estimating DTIs and building a drug-recommendation workflow

xinformatics/BlendedICU

xinformatics/ARDS-definitions

xinformatics/Awesome-GNN4TS

📈 Awesome resources related to GNNs for Time Series Analysis (GNN4TS) 🔥 https://arxiv.org/abs/2307.03759

xinformatics/BARTSmiles

BARTSmiles, generative masked language model for molecular representations

xinformatics/bert_emotion

xinformatics/COPD-Hypoxemia

xinformatics/DeepProSite

xinformatics/example-notebooks

examples for using Neurodesk within Notebooks

xinformatics/featuretimeattention

Code for AMIA 2023 Poster

xinformatics/GML2023

Graph Machine Learning course, Xavier Bresson, 2023

xinformatics/graphs4mer

xinformatics/GTN

xinformatics/HIRID-ICU-Benchmark

Repository for the HiRID ICU Benchmark (HiB) project

xinformatics/HOGNNU-Python

Hands-On Graph Neural Networks Using Python

xinformatics/iterative_recon_bme516

xinformatics/METRE

A Multidatabase ExTRaction PipEline (METRE) for facile cross validation in critical care research

xinformatics/MILTimeSeriesClassification

Inherently Interpretable Time Series Classification via Multiple Instance Learning (MILLET)

xinformatics/Molecular-homology

xinformatics/NatParksPalettes

Color palette package inspired by National Parks

xinformatics/nsf-proposal

LaTeX samples for NSF Research.gov Proposal Submission. For more information about Research.gov Proposal Submission visit https://www.research.gov/research-web/content/aboutpsm Feedback syee@nsf.gov

xinformatics/SELFormer

SELFormer: Molecular Representation Learning via SELFIES Language Models

xinformatics/SimpleEMRSystem

The Simple EMR System is a rapidly deployable and readily customizable electronic medical record (EMR) user interface for supporting laboratory-based research studies of EMR design and usability.

xinformatics/SimTSC

[SDM 2022] Towards Similarity-Aware Time-Series Classification

xinformatics/spacetimeformer

Multivariate Time Series Forecasting with efficient Transformers. Code for the paper "Long-Range Transformers for Dynamic Spatiotemporal Forecasting."

xinformatics/STAR

[ECCV 2020] Code for "Spatio-Temporal Graph Transformer Networks for Pedestrian Trajectory Prediction"

xinformatics/time_interpret

Unified Model Interpretability Library for Time Series

xinformatics/TimeX

Time series explainability via self-supervised model behavior consistency

xinformatics/tls

Code for paper Temporal Label Smoothing for Early Event Prediction (ICML 2023)

xinformatics/xinformatics

xinformatics/xinformatics.github.io