xinkwu's Stars
caulai/Mo17_genome_assembly
mbreese/swalign
Smith-Waterman local aligner
ncbi/ngs
NGS Language Bindings
bergmanlab/drosophila-transposons
Drosophila transposable element canonical sequences
i5K-KINBRE-script-share/Irys-scaffolding
scripts to parse IrysView output
dylanaraps/pure-bash-bible
📖 A collection of pure bash alternatives to external processes.
jtriley/mit-beamer
Latex-beamer presentation template for MIT (derived from Andreas Kloeckner's brown-beamer)
SUSTC/sustech-slides
LaTeX Beamer template for presentations.
jnktsj/DNApi
De novo adapter prediction algorithm for small RNA sequencing data
koalaman/shellcheck
ShellCheck, a static analysis tool for shell scripts
vinta/awesome-python
An opinionated list of awesome Python frameworks, libraries, software and resources.
jbhuang0604/awesome-computer-vision
A curated list of awesome computer vision resources
philres/ngmlr
NGMLR is a long-read mapper designed to align PacBio or Oxford Nanopore (standard and ultra-long) to a reference genome with a focus on reads that span structural variations
fritzsedlazeck/Sniffles
Structural variation caller using third generation sequencing
salomonelli/best-resume-ever
:necktie: :briefcase: Build fast :rocket: and easy multiple beautiful resumes and create your best CV ever! Made with Vue and LESS.
frappe/charts
Simple, responsive, modern SVG Charts with zero dependencies
NVIDIA/FastPhotoStyle
Style transfer, deep learning, feature transform
KorfLab/SNAP
Gene prediction software
JialiUMassWengLab/TEMP
TEMP is a software package for detecting transposable elements (TEs) insertions and excisions from pooled high-throughput sequencing data
ponnhide/pyCircos
python Circos
bowhan/piPipes
piRNA pipeline collection developed in the Zamore Lab and ZLab in UMass Med School
abyzovlab/CNVnator
a tool for CNV discovery and genotyping from depth-of-coverage by mapped reads
plotly/plotly.py
The interactive graphing library for Python :sparkles: This project now includes Plotly Express!
wyp1125/MCScanX
MCScanX: Multiple Collinearity Scan toolkit X version. The most popular synteny analysis tool in the world!
MadsAlbertsen/multi-metagenome
Scripts and tutorials on how to assemble individual microbial genomes from metagenomes
mcfrith/last-rna
aidenlab/juicer
A One-Click System for Analyzing Loop-Resolution Hi-C Experiments
aidenlab/JuiceboxLegacy
OLD REPOSITORY - Go to
akdemirlab/HiCPlotter
“When everything is connected to everything else, for better or worse, everything matters.” Bruce Mau
nservant/HiC-Pro
HiC-Pro: An optimized and flexible pipeline for Hi-C data processing