xinkwu

xinkwu's Stars

• olivertomic/hoggorm

  Explorative multivariate statistics in Python

  Language:Python8126

• jessieren/DeepVirFinder

  Identifying viruses from metagenomic data by deep learning

  Language:Python11331

• saketkc/pysradb

  Package for fetching metadata and downloading data from SRA/ENA/GEO

  Language:Python30049

• neherlab/treetime

  Maximum likelihood inference of time stamped phylogenies and ancestral reconstruction

  Language:Jupyter Notebook21454

• nextstrain/augur

  Pipeline components for real-time phylodynamic analysis

  Language:Python268127

• bioinf-mcb/gisaid-scrapper

  Scrapping tool for GISAID data regarding SARS-CoV-2

  Language:Python4116

• alek0991/iSAFE

  Pinpoints the mutation favored by selection

  Language:Python3211

• WGLab/dragonstar2019

  13398

• virgili0/Virgilio

  Your new Mentor for Data Science E-Learning.

  Language:Jupyter Notebook13.6k2.5k

• selfteaching/the-craft-of-selfteaching

  One has no future if one couldn't teach themself.

  Language:Jupyter Notebook15.1k16.3k

• alexdobin/STAR

  RNA-seq aligner

  Language:C1.8k498

• testerSunshine/12306

  12306智能刷票，订票

  Language:Python33.7k9.8k

• crazyhottommy/getting-started-with-genomics-tools-and-resources

  Unix, R and python tools for genomics and data science

  Language:Shell1.1k340

• GokuMohandas/Made-With-ML

  Learn how to design, develop, deploy and iterate on production-grade ML applications.

  Language:Jupyter Notebook36.6k5.8k

• apache/echarts

  Apache ECharts is a powerful, interactive charting and data visualization library for browser

  Language:TypeScript59.6k19.6k

• ImSoErgodic/py-upset

  A pure-python implementation of the UpSet suite of visualisation methods by Lex, Gehlenborg et al.

  Language:Python31057

• deeptools/pyGenomeTracks

  python module to plot beautiful and highly customizable genome browser tracks

  Language:Python738111

• cole-trapnell-lab/cicero-release

  Language:R5314

• ryanlayer/samplot

  Plot structural variant signals from many BAMs and CRAMs

  Language:Python50466

• bioinfolabmu/piRNN

  Language:Python2

• CyC2018/CS-Notes

  :books: 技术面试必备基础知识、Leetcode、计算机操作系统、计算机网络、系统设计

  174k50.8k

• TheAlgorithms/Python

  All Algorithms implemented in Python

  Language:Python182k44k

• YinLiLin/CMplot

  📊 Circular and Rectangular Manhattan Plot

  Language:R501111

• ay-lab/fithic

  Fit-Hi-C is a tool for assigning statistical confidence estimates to chromosomal contact maps produced by genome-wide genome architecture assays such as Hi-C.

  Language:Python7317

• marbl/SALSA

  SALSA: A tool to scaffold long read assemblies with Hi-C data

  Language:Python17247

• stephenturner/qqman

  An R package for creating Q-Q and manhattan plots from GWAS results

  Language:HTML15193

• tanghaibao/jcvi

  Python library to facilitate genome assembly, annotation, and comparative genomics

  Language:Python714185

• davidemms/OrthoFinder

  Phylogenetic orthology inference for comparative genomics

  Language:Python647185

• bernatgel/karyoploteR

  karyoploteR - An R/Bioconductor package to plot arbitrary data along the genome

  Language:R29342

• x-hw/amazing-qr

  💮 amazing QRCode generator in Python (supporting animated gif) - Python amazing 二维码生成器（支持 gif 动态图片二维码）

  Language:Python10.3k1.6k