Pinned Repositories
pysofi
PySOFI is a Python package for SOFI analysis.
aydin
Aydin — User-friendly, Fast, Self-Supervised and Unsupervised Image Denoising for All.
binder-framework
A sample repo on deploying to Binder
coPylot
coPylot - microscope control
llsmvis
data analysis codes for the lattice light sheet microscopy (LLSM) datasets acquired at the LLSM at LLNL.
PyPRIS
This is a python package to perform progressive refinement method for sparse recovery (PRIS)
pysofi
PySOFI is a Python package for SOFI analysis.
RealisticSimulator_3D
SOFI2.0
this package is associated with our manuscript "Moments reconstruction and local dynamic range compression of high order Super-resolution Optical Fluctuation Imaging"
SR_simu3D
This is a simulation package designed to create realistic simulations for the study of super-resolution of fluorescence microscopy.
xiyuyi's Repositories
xiyuyi/SOFI2.0
this package is associated with our manuscript "Moments reconstruction and local dynamic range compression of high order Super-resolution Optical Fluctuation Imaging"
xiyuyi/SR_simu3D
This is a simulation package designed to create realistic simulations for the study of super-resolution of fluorescence microscopy.
xiyuyi/aydin
Aydin — User-friendly, Fast, Self-Supervised and Unsupervised Image Denoising for All.
xiyuyi/binder-framework
A sample repo on deploying to Binder
xiyuyi/coPylot
coPylot - microscope control
xiyuyi/cryoSOFI
xiyuyi/llsmvis
data analysis codes for the lattice light sheet microscopy (LLSM) datasets acquired at the LLSM at LLNL.
xiyuyi/PyPRIS
This is a python package to perform progressive refinement method for sparse recovery (PRIS)
xiyuyi/pysofi
PySOFI is a Python package for SOFI analysis.
xiyuyi/RealisticSimulator_3D
xiyuyi/daxi
High-Resolution, Large Field-of-View, and Multi-ViewSingle Objective Light-Sheet Microscopy
xiyuyi/daxi-controller
python controller codes for daxi microscope
xiyuyi/FRETBursts
Burst analysis software for single and multi-spot single-molecule FRET (smFRET) data.
xiyuyi/FRETBursts_notebooks
Tutorials and usage examples for FRETBursts software
xiyuyi/napari
napari: a fast, interactive, multi-dimensional image viewer for python
xiyuyi/napari-training-course
Lectures for a napari training course
xiyuyi/OpenVisus
Open Source distribution of the ViSUS capabilities
xiyuyi/phconvert
Convert Beker&Hickl, PicoQuant and other formats to Photon-HDF5
xiyuyi/SOFI
Data analysis package for super-resolution of optical fluctuation imaging
xiyuyi/TasteFusion
xiyuyi/xy_fInterp_forTIFF
This code performs Fourier interpolation of each frame from the input TIFF stack