xji3

xji3's Stars

• veg/pub-data

  Publically available alignments (and trees) from published dN/dS analyses

  2

• igvteam/igv-reports

  Python application to generate self-contained pages embedding IGV visualizations, with no dependency on original input files.

  Language:Python34351

• GPUPeople/spECK

  Efficient SpGEMM on GPU using CUDA and CSR

  Language:Cuda5015

• tsinghua-ideal/spada-sim

  The simulator for SPADA, an SpGEMM accelerator with adaptive dataflow

  Language:Rust263

• opencollab/arpack-ng

  Collection of Fortran77 subroutines designed to solve large scale eigenvalue problems.

  Language:Fortran281122

• lorentzbf/OpSparse

  Source code of the paper "OpSparse: a Highly Optimized Framework for Sparse General Matrix Multiplication on GPUs"

  Language:Cuda111

• Bio-protocol/template

  Template Repo for the bio-protocol eBook: Bioinformatics Recipes for Plant Genomics - data, code and workflows

  Language:HTML23

• deepskystacker/DSS

  DeepSkyStacker

  Language:C++89590

• yatisht/usher

  Ultrafast Sample Placement on Existing Trees

  Language:C++12141

• rfordatascience/tidytuesday

  Official repo for the #tidytuesday project

  Language:HTML6.7k2.4k

• KennethLange/AlgorithmsFromTheBook.jl

  Julia code in Kenneth Lange's Algorithms from THE BOOK

  Language:Julia297

• matterport/Mask_RCNN

  Mask R-CNN for object detection and instance segmentation on Keras and TensorFlow

  Language:Python24.5k11.7k

• SciML/ExponentialUtilities.jl

  Fast and differentiable implementations of matrix exponentials, Krylov exponential matrix-vector multiplications ("expmv"), KIOPS, ExpoKit functions, and more. All your exponential needs in SciML form.

  Language:Julia9329

• mpwint/COVID-ABM

  Agent-Based Model of SARS-CoV-2-Induced Lung Damage

  Language:HTML1

• mikelove/awesome-multi-omics

  List of software packages for multi-omics analysis

  707160

• alanderos91/COVID19SchoolReopening

  Language:HTML1

• simd-everywhere/simde

  Implementations of SIMD instruction sets for systems which don't natively support them.

  Language:C2.3k241

• yixuan/spectra

  A header-only C++ library for large scale eigenvalue problems

  Language:C++740127

• gideonsimpson/TestLandscapes.jl

  Julia implementations of basic potential energy landscapes for testing sampling, optimization, etc.

  Language:Julia6

• gideonsimpson/BasicMD.jl

  A collection of basic routines for Molecular Dynamics simulations implemented in Julia

  Language:Julia121

• jfiksel/github-classroom-for-teachers

  20971

• vnminin/uci_covid_modeling

  Language:R82

• rxhanson/Rectangle

  Move and resize windows on macOS with keyboard shortcuts and snap areas

  Language:Swift25.6k767

• pbastide/HMC_OU

  Companion analyses with Bastide et al. 2020.

  Language:R3

• OpenMendel/LangeSymposium-ProgrammingWorkshop-20202022

  OpenMendel tutorials for Lange's Symposium Programming Workshop

  Language:HTML51

• LangeSymposium/2020

  Inaugural Lange Symposium and Software Workshop, Feb 21-22, 2020

  41

• TuringLang/AdvancedHMC.jl

  Robust, modular and efficient implementation of advanced Hamiltonian Monte Carlo algorithms

  Language:Jupyter Notebook22839

• pbastide/PhylogeneticEM

  Implementation of the EM algorithm for the detection of shifts in a phylogeny.

  Language:R164

• CNugteren/CLBlast

  Tuned OpenCL BLAS

  Language:C++1k205

• euske/pdfminer

  Python PDF Parser (Not actively maintained). Check out pdfminer.six.

  Language:Python5.2k1.1k