Pinned Repositories
cscMap
cscMap is a bioinformatics pipeline to search for the RNA chimeras resulted from fusions of the transcripts encoded by the two opposite DNA strands.
DeepLinc
De novo reconstruction of cell interaction landscapes from single-cell spatial transcriptome data
ORFcalling
A tutorial review of some methods for ORF calling
RiboCode
release version
RiboMiner
a toolset for mining multi-dimensional features of the translatome with ribosome profiling data
RocA
Reanalysis of ribosome profiling datasets reveals a novel function of rocaglamide A in perturbing the dynamics of translation elongation via eIF4A
RPF-count-CDS
Counting the RPF reads map to CDS region
SCASL
single-cell clustering based on alternative splicing landscapes
xtail
Genome-wide assessment of differential translations with ribosome profiling data
xryanglab's Repositories
xryanglab/RiboCode
release version
xryanglab/xtail
Genome-wide assessment of differential translations with ribosome profiling data
xryanglab/SCASL
single-cell clustering based on alternative splicing landscapes
xryanglab/DeepLinc
De novo reconstruction of cell interaction landscapes from single-cell spatial transcriptome data
xryanglab/RiboMiner
a toolset for mining multi-dimensional features of the translatome with ribosome profiling data
xryanglab/cscMap
cscMap is a bioinformatics pipeline to search for the RNA chimeras resulted from fusions of the transcripts encoded by the two opposite DNA strands.
xryanglab/ORFcalling
A tutorial review of some methods for ORF calling
xryanglab/RocA
Reanalysis of ribosome profiling datasets reveals a novel function of rocaglamide A in perturbing the dynamics of translation elongation via eIF4A
xryanglab/RPF-count-CDS
Counting the RPF reads map to CDS region