Pinned Repositories
algorithms
Minimal examples of data structures and algorithms in Python
alphamissense
Atlas-CNV
Method to detect exonic CNVs in NGS Gene Targeted Panels
autopvs1
An automatic classification tool for PVS1 interpretation of null variants
Awesome-Bioinformatics
A curated list of awesome Bioinformatics libraries and software.
bam-readcount
count DNA sequence reads in BAM files
bamdst
a lightweight bam file depth statistical tool
bcbio-nextgen
Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis
bioconvert
Bioconvert is a collaborative project to facilitate the interconversion of life science data from one format to another.
snakemake
This is the development home of the workflow management system Snakemake. For general information, see
xuexiaohua-bio's Repositories
xuexiaohua-bio/algorithms
Minimal examples of data structures and algorithms in Python
xuexiaohua-bio/alphamissense
xuexiaohua-bio/autopvs1
An automatic classification tool for PVS1 interpretation of null variants
xuexiaohua-bio/Awesome-Bioinformatics
A curated list of awesome Bioinformatics libraries and software.
xuexiaohua-bio/bioconvert
Bioconvert is a collaborative project to facilitate the interconversion of life science data from one format to another.
xuexiaohua-bio/cnv-patissier
Orchestrates your CNV bakeoff
xuexiaohua-bio/cpp_new_features
2021年最新整理， C++ 学习资料，含C++ 11 / 14 / 17 / 20 / 23 新特性、入门教程、推荐书籍、优质文章、学习笔记、教学视频等
xuexiaohua-bio/delly
DELLY2: Structural variant discovery by integrated paired-end and split-read analysis
xuexiaohua-bio/FastAdmin
🤪 FastAPI + Vue构建的Mall项目后台管理
xuexiaohua-bio/GeneFuse
Gene fusion detection and visualization
xuexiaohua-bio/go-daily-lib
Go 每日一库
xuexiaohua-bio/gofpdf
A PDF document generator with high level support for text, drawing and images
xuexiaohua-bio/HLAminer
⛏HLA predictions from NGS shotgun data
xuexiaohua-bio/Machine_Learning_Code_Implementation
Mathematical derivation and pure Python code implementation of machine learning algorithms.
xuexiaohua-bio/Maverick
A Mendelian approach to variant effect prediction built in keras
xuexiaohua-bio/MGEfinder
A toolbox for identifying mobile genetic element (MGE) insertions from short-read sequencing data of bacterial isolates.
xuexiaohua-bio/mutalyzer
Tool suite for HGVS variant descriptions
xuexiaohua-bio/octopus
Bayesian haplotype-based mutation calling
xuexiaohua-bio/omicverse
A python library for multi omics included bulk and single cell RNA-seq analysis.
xuexiaohua-bio/OrthoFinder
Phylogenetic orthology inference for comparative genomics
xuexiaohua-bio/pigx_rnaseq
Pipeline for RNAseq
xuexiaohua-bio/pVACtools
xuexiaohua-bio/pystring
C++ functions matching the interface and behavior of python string methods with std::string
xuexiaohua-bio/RNAseqdrop
Pipeline to find aberrant events in RNA-Seq data, useful for diagnosis of rare disorders
xuexiaohua-bio/SpliceAI
A deep learning-based tool to identify splice variants
xuexiaohua-bio/Statistical-Learning-Method_Code
手写实现李航《统计学习方法》书中全部算法
xuexiaohua-bio/text2vec
text2vec, text to vector. 文本向量表征工具，把文本转化为向量矩阵，实现了Word2Vec、RankBM25、Sentence-BERT、CoSENT等文本表征、文本相似度计算模型，开箱即用。
xuexiaohua-bio/Tutorialscuda
Some basic programming tutorials
xuexiaohua-bio/vcf2circos
python plotly Circos from VCF
xuexiaohua-bio/vxe-table
🐬 vxe-table vue 表格解决方案