Pinned Repositories
10xv2_10xv3_barcodes
whitelist barcodes for 10xv2 and 10xv3 chemistry
academic-page
biopieces
Biopieces is a bioinformatic framework of tools easily used and easily created.
ohia.ai
Sonogram-1
A Spectrogram Tool
xyl012's Repositories
xyl012/biopieces
Biopieces is a bioinformatic framework of tools easily used and easily created.
xyl012/ohia.ai
xyl012/asciicast2gif
Generate GIF animations from asciicasts (asciinema recordings)
xyl012/basebits
A memory efficient encoding for short DNA sequences and some associated operations.
xyl012/bioawk
BWK awk modified for biological data
xyl012/bioconda-recipes
Conda recipes for the bioconda channel.
xyl012/case-studies
Analysis of various tricky Rust code
xyl012/COMETSC
COMET Single-Cell Marker Detection tool
xyl012/cytoscope
A Shiny app for visualizing and exploring single cell RNA-sequencing data
xyl012/docker-python
Kaggle Python docker image
xyl012/evolve-sbrain
Parallel evolutionary programming using Semantic Brain
xyl012/fast-math
Fast, approximate versions of mathematical functions
xyl012/gatk4-pathseq
This repo is archived, the these workflows are still available in the GATK repository under the scripts directory. The workflows are also organized in Dockstore in the GATK Best Practices Workflows collection.
xyl012/instagram-scraper
Scrapes instagram by hashtag and trains an inception model to discern between them
xyl012/pagerank
Implementation of PageRank in timely dataflow
xyl012/permutohedron
xyl012/pizzly
Fast fusion detection using kallisto
xyl012/Probable-Wordlists
Version 2 is live! Wordlists sorted by probability originally created for password generation and testing - make sure your passwords aren't popular!
xyl012/rig
A bigWig reader in Rust
xyl012/rust-shell
Helper library for std::process::Command to write shell script like tasks in rust
xyl012/scvelo
RNA Velocity using dynamical modeling
xyl012/seqseek
Easy access to human reference genome sequences
xyl012/seuratv3wizard
A web-based interactive (wizard style) application to perform a guided single-cell RNA-seq data analysis and clustering based on Seurat v3
xyl012/Shannon
RNA-Seq
xyl012/Shannon_Cpp_RNA_seq
xyl012/Signal-Alignment
Algorithms to align 1D signals via cross correlation and likelihood maximization.
xyl012/sonogram
A spectrograph utility written in Rust
xyl012/spellcheck
A spell-checker written in Rust
xyl012/telebuilder
Identify transposable element loci from repeat annotations.
xyl012/warc
:card_index: Tools to Work with the Web Archive Ecosystem in R