yachimura-lab/scEGOT

Issues

• Make the velocity arrows resizable

  #134 opened 3 months ago by nekonekko
  1

• Use screcode's plotting function to plot cell velocity

  #136 opened 3 months ago by nekonekko
  0

• Fix scEGOT_Figures.ipynb

  #135 opened 3 months ago by nekonekko
  0

• Make comparisons with other methods

  #130 opened 4 months ago by nekonekko
  0

• Problem with scegot==0.2.0

  #123 opened 8 months ago by nekonekko
  0

• Automatically copy README for documentation

  #127 opened 8 months ago by nekonekko
  0

• Update versions of dependent packages

  #119 opened 8 months ago by nekonekko
  0

• Support matplotlib>=3.8.0

  #116 opened 8 months ago by nekonekko
  1

• Cannot save figure of plot_true_and_interpolation_distributions()

  #115 opened 8 months ago by nekonekko
  0

• Organise imports

  #111 opened 9 months ago by nekonekko
  0

• Improve Tutorial

  #110 opened 9 months ago by nekonekko
  0

• Refactor function and variable names.

  #112 opened 9 months ago by nekonekko
  0

• Migration of GitHub Actions: peaceiris/actions-gh-pages to official method

  #107 opened 10 months ago by nekonekko
  1

• Support for Python==3.12

  #106 opened 10 months ago by nekonekko
  1

• [Bug] pd.DataFrame.apply(include_groups=False) does not work on Pandas less than 2.2.0

  #103 opened 10 months ago by nekonekko
  0

• DeprecationWarning: DataFrameGroupBy.apply

  #95 opened a year ago by nekonekko
  0

• Enable visualization of non-highly variable genes

  #96 opened a year ago by nekonekko
  0

• Edges of simple cell state graph are hard to see

  #88 opened a year ago by nekonekko
  0

• Unable to import scegot due to version conflicts in dependent packages

  #89 opened a year ago by nekonekko
  0

• Unused packages in dependencies

  #82 opened a year ago by nekonekko
  1

• Vulnerability in dependencies

  #84 opened a year ago by nekonekko
  0

• Recommend adding DocString

  #83 opened a year ago by nekonekko
  0

• Cannot move from github pages to github project

  #79 opened a year ago by nekonekko
  1

• Vulnerability in urllib3

  #74 opened a year ago by nekonekko
  0

• [Bug] The order of days when using AnnData is sorted by dictionary order.

  #71 opened a year ago by nekonekko
  0

• Vulnerability in jupyter-server and tornado

  #68 opened a year ago by nekonekko
  0

• [Bug] The order of the nodes in the simple cell state graph is wrong

  #67 opened a year ago by nekonekko
  0

• [Bug] gmm_labels_modified type changes before and after replace_gmm_labels()

  #76 opened a year ago by nekonekko
  0