This repository contains code and data for the nanoHUB app: https://nanohub.org/tools/pc4livermedium
If you use the code in your work, please cite Impact of tumor-parenchyma biomechanics on liver metastatic progression: a multi-model approach.
@article {Wang2020.05.04.074989,
author = {Wang, Yafei and Brodin, Erik and Nishii, Kenichiro and Frieboes, Hermann B and Mumenthaler, Shannon and Sparks, Jessica L and Macklin, Paul},
title = {Impact of tumor-parenchyma biomechanics on liver metastatic progression: a multi-model approach},
elocation-id = {2020.05.04.074989},
year = {2020},
doi = {10.1101/2020.05.04.074989},
publisher = {Cold Spring Harbor Laboratory},
URL = {https://www.biorxiv.org/content/early/2020/05/05/2020.05.04.074989},
eprint = {https://www.biorxiv.org/content/early/2020/05/05/2020.05.04.074989.full.pdf},
journal = {bioRxiv}
}
- This version is actually same as 2.0. It's released in order to match with nanoHUB gui version
- Add an animate tap
- Fix bugs in
src/custom_modules/liver_functions.cpp
void HCT116_phenotype_update_function( Cell* pCell , Phenotype& phenotype, double dt )
{
static int start_phase_index = Ki67_advanced.find_phase_index( PhysiCell_constants::Ki67_negative ); // 0
static int end_phase_index = Ki67_advanced.find_phase_index( PhysiCell_constants::Ki67_positive_premitotic ); // 1
}
This is initial release.