yang20085936

3D-CNN-resnet-keras

Residual version of the 3DCNN net.

3d-prostate-segmentation

Segmentation of prostate from MRI scans

3D-VoxelDataGenerator

Python generator for voxel data augmentation

machine_learning_beginner

机器学习初学者公众号作品

medicaldetectiontoolkit

The Medical Detection Toolkit contains 2D + 3D implementations of prevalent object detectors such as Mask R-CNN, Retina Net, Retina U-Net, as well as a training and inference framework focused on dealing with medical images.

MONAI

AI Toolkit for Healthcare Imaging

pyradiomics

Open-source python package for the extraction of Radiomics features from 2D and 3D images and binary masks.

qupath

QuPath - Bioimage analysis & digital pathology

slideflow

Deep learning pipeline for digital pathology, with both Tensorflow and PyTorch support.

talos

Hyperparameter Optimization for TensorFlow, Keras and PyTorch

yang20085936/MONAI

AI Toolkit for Healthcare Imaging

yang20085936/qupath

QuPath - Bioimage analysis & digital pathology

yang20085936/slideflow

Deep learning pipeline for digital pathology, with both Tensorflow and PyTorch support.

yang20085936/ASAP

Program for the analysis and visualization of whole-slide images in digital pathology

yang20085936/CLAM

Data-efficient and weakly supervised computational pathology on whole slide images - Nature Biomedical Engineering

yang20085936/clifs

Contrastive Language-Image Forensic Search allows free text searching through videos using OpenAI's machine learning model CLIP

yang20085936/DeepGleason

a System for Automated Gleason Grading of Prostate Cancer using Deep Neural Networks

yang20085936/deepslide

Code for the Nature Scientific Reports paper "Pathologist-level classification of histologic patterns on resected lung adenocarcinoma slides with deep neural networks." A sliding window framework for classification of high resolution whole-slide images, often microscopy or histopathology images.

yang20085936/dicom2nifti

yang20085936/FAST-Pathology

⚡ Open-source software for deep learning-based digital pathology

yang20085936/fotiaoqiang

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yang20085936/foundation-cancer-image-biomarker

Code and evaluation repository for the paper

yang20085936/gpt_academic

为ChatGPT/GLM提供图形交互界面，特别优化论文阅读润色体验，模块化设计支持自定义快捷按钮&函数插件，支持代码块表格显示，Tex公式双显示，支持Python和C++等项目剖析&自译解功能，PDF/LaTex论文翻译&总结功能，支持并行问询多种LLM模型，支持清华chatglm等本地模型。兼容复旦MOSS, llama, rwkv, 盘古, newbing, claude等

yang20085936/Histo-cloud

yang20085936/histolab

Library for Digital Pathology Image Processing

yang20085936/HistomicsTK

A Python toolkit for pathology image analysis algorithms.

yang20085936/image-segmentation-keras

Implementation of Segnet, FCN, UNet , PSPNet and other models in Keras.

yang20085936/imgclsmob

Sandbox for training deep learning networks

yang20085936/Keras-GAN

Keras implementations of Generative Adversarial Networks.

yang20085936/LLMs-In-China

**大模型

yang20085936/MedicalNet

Many studies have shown that the performance on deep learning is significantly affected by volume of training data. The MedicalNet project provides a series of 3D-ResNet pre-trained models and relative code.

yang20085936/MIL-nature-medicine-2019

yang20085936/nnUNet

yang20085936/NoCodeSeg

🔬 Code-free deep segmentation for computational pathology

yang20085936/PathomicFusion

Fusing Histology and Genomics via Deep Learning - IEEE TMI

yang20085936/pytorch-3dunet

3D U-Net model for volumetric semantic segmentation written in pytorch

yang20085936/segmentation_models

Segmentation models with pretrained backbones. Keras and TensorFlow Keras.

yang20085936/SequencingCancerFinder

yang20085936/share

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yang20085936/tiatoolbox

Computational Pathology Toolbox developed by TIA Centre, University of Warwick.