Pinned Repositories
BE
computational_biology
course material
F2_re_seq
FreebayesSnakemake
Freebayes Snakemake pipline
GBSA
N_tabacum_Genome_paper
Pine
Chinese pine TE annotation
Stripes
Genotyping by low-coverage whole-genome sequencing in intercross pedigrees from outbred founders
Tobacco_Bioinformatic_plartform
Yeast-GGE
This is the analysis scripts for a yeast manuscript
yanjunzan's Repositories
yanjunzan/computational_biology
course material
yanjunzan/FreebayesSnakemake
Freebayes Snakemake pipline
yanjunzan/N_tabacum_Genome_paper
yanjunzan/scripts
Scripts for analysis used during the course
yanjunzan/Tobacco_Bioinformatic_plartform
yanjunzan/AIL-scan
yanjunzan/awesome-single-cell
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
yanjunzan/biocode
Bioinformatics code libraries and scripts
yanjunzan/CMplot
📊 Circular and Rectangular Manhattan Plot
yanjunzan/Data-Science-Interview-Questions-Answers
yanjunzan/functional-annotation
Pipeline for functional annotation of genomes by integrating data from RNA-seq, ChIP-seq, DNase-seq, etc.
yanjunzan/geta
yanjunzan/grenepipe
Snakemake pipeline for variant calling from raw sequences
yanjunzan/leafcutter-pipeline
Differential splicing and visualisation pipeline for the Raj lab
yanjunzan/plinkQC
R package for quality control of plink genetic datasets
yanjunzan/Populus_genomic_prediction_climate_vulnerability
yanjunzan/RNA-Snakemake
RNA-Snakemake
yanjunzan/scikit-learn-videos
Jupyter notebooks from the scikit-learn video series
yanjunzan/scRNA.seq.course
Analysis of single cell RNA-seq data course
yanjunzan/short_read_sv_pipeline
yanjunzan/snakeSV
Snakemake pipeline for SV discovery and analysis
yanjunzan/SolEvo_PotatoDele
Use hifi to assembly the Sol genome, and dissecting Sol evo
yanjunzan/TFODApp
yanjunzan/TFODCourse
yanjunzan/TFODRPi
yanjunzan/TGG
tomato graph pangenome
yanjunzan/train-aquafaang-bioinf
AQUA-FAANG Bioinformatics training course on regulatory elements
yanjunzan/vcf2phylip
Convert SNPs in VCF format to PHYLIP, NEXUS, binary NEXUS, or FASTA alignments for phylogenetic analysis
yanjunzan/xalpha
基金投资管理回测引擎
yanjunzan/yanjunzan.github.io
Zan Lab