Pinned Repositories
PanPep
conda
A system-level, binary package and environment manager running on all major operating systems and platforms.
epiTCR
epiTCR: a highly sensitive predictor for TCR–peptide binding
TCRconv
TCRconv is a deep learning model for predicting recognition between T cell receptors and epitopes. It uses protBERT embeddings for the TCRs and convolutional neural networks for the prediction.
TEINet
TEINet: a deep learning framework for prediction of TCR-epitope binding specificity
sra-tools
SRA Tools
TITAN
Code for "T Cell Receptor Specificity Prediction with Bimodal Attention Networks" (https://doi.org/10.1093/bioinformatics/btab294, ISMB 2021)
ImRex
Generic TCR-epitope recognition prediction using CNN approach on both known and novel epitopes
DeepAIR
cellranger
10x Genomics Single Cell 3' Gene Expression and VDJ Assembly
yanpinlu's Repositories
yanpinlu/cellranger
10x Genomics Single Cell 3' Gene Expression and VDJ Assembly