yasirs

Pinned Repositories

BioGRID-Nets
Data Munging for BioGRID data to form interaction networks for further processing.
Language:Python2 2 01
CIWOG
CIWOG: common introns within orthologous genes
Language:Perl1 2 01
cmn
Fork of the HRG algorithm from Hierarchical structure and the prediction of missing links in networks. A. Clauset, C. Moore, and M.E.J. Newman. Nature 453, 98 - 101 (2008) source: http://tuvalu.santafe.edu/~aaronc/hierarchy/
Language:C++2 3 00
complexnets
Language:Python1 4 00
CppBugs
c++ version of BUGS
Language:C++1 2 00
d3
A JavaScript visualization library for HTML and SVG.
Language:JavaScript1 2 00
gibbsLogistic
Language:C++21
GO-similarity
Python code for analyzing Gene Ontology annotations and computing semantic similarity
Language:Python1 2 00
PyFactual
Factual Python API
Language:Python2 2 01
yard
Yet another ROC curve drawer
Language:Python2 2 00

yasirs's Repositories

yasirs/Robust-GSEA
An in-house R package for gene set enrichment analysis to mitigate commonly observed problems.
Language:R1 3 0
yasirs/tfbs
Statistically linking ELI gene expression to TF binding site numbers
Language:R1 2 0
yasirs/agglomerative-graph-clustering
Language:C++2 0
yasirs/alphafold
Open source code for AlphaFold.
Language:Python1 0
yasirs/blasr
BLASR: The PacBio® long read aligner
Language:C2 0
yasirs/BnapusResults
Language:HTML1 0
yasirs/bookdown
Authoring Books with R Markdown
Language:JavaScript2 0
yasirs/bookdown-demo
A minimal book example using bookdown
Language:CSS2 0
yasirs/cardiac-maturation-submission
Language:Jupyter Notebook1 1
yasirs/Chado
the GMOD database schema
Language:PLpgSQL2 0
yasirs/gcn
Implementation of Graph Convolutional Networks in TensorFlow
Language:Python2 0
yasirs/Heatplus
Annotated heatmaps for R & Bioconductor
Language:R2 0
yasirs/HifOscillation
Language:R1 0
yasirs/HiveR
An R package for creating and plotting 2D and 3D hive plots.
Language:R2 0
yasirs/hypoxia-oscillations
Language:Jupyter Notebook0 0
yasirs/libzmq
ZeroMQ core engine in C++, implements ZMTP/3.0
Language:C++2 0
yasirs/matchSCore
Language:R
yasirs/notes-github-pages
My notes repository
1 0
yasirs/NRF2network
NRF2 network
Language:JavaScript1 0
yasirs/openxlsx
R package for .xlsx file reading and writing.
Language:R2 0
yasirs/OpticalPooledScreens
Examples and code for optical pooled screens
Language:Python
yasirs/pander-1
An R Pandoc Writer
Language:R2 0
yasirs/pathview
Read-only mirror of "pathview" from r-forge SVN.
Language:R2 0
yasirs/PrimerBlast
This is a python script that allows the user to enter two genomic primer sequences and retrieves the sequence in between them.
Language:Python2 0
yasirs/pyinex
Automatically exported from code.google.com/p/pyinex
1 6
yasirs/torch-gcn
Language:Jupyter Notebook
yasirs/units
Measurement units for R
Language:R2 0
yasirs/webshot
Take screenshots of web pages from R
Language:JavaScript2 0
yasirs/website
Repository for Stencila's website.
Language:HTML2 0
yasirs/yasirs.github.io
Language:HTML