yazhinia

Computational Biologist

Max Planck Institute for Biophysical ChemistryGoettingen, Germany

Pinned Repositories

DeepDPM
"DeepDPM: Deep Clustering With An Unknown Number of Clusters" [Ronen, Finder, and Freifeld, CVPR 2022]
Language:Python781 9 6176
SemiBin
SemiBin: metagenomics binning with self-supervised deep learning
Language:Python120 6 11912
strobealign
Aligns short reads using dynamic seed size with strobemers
Language:C++159 11 17918
binning_benchmarking
Language:Jupyter Notebook00
McDevol
Language:Python0 3 00
leidenalg
Implementation of the Leiden algorithm for various quality functions to be used with igraph in Python.
Language:Python632 14 13979
aligner2counts
Language:C++0 1 00
convertfasta
Convert multi line fasta format to single line format
Language:C++0 1 00
McDevol
A metagenome binning tool
Language:Python0 2 00
spacepharer
SpacePHARER CRISPR Spacer Phage-Host pAiRs findER
Language:C0 0 00

yazhinia's Repositories

yazhinia/aligner2counts
Language:C++0 1 00
yazhinia/convertfasta
Convert multi line fasta format to single line format
Language:C++0 1 00
yazhinia/McDevol
A metagenome binning tool
Language:Python0 2 00
yazhinia/spacepharer
SpacePHARER CRISPR Spacer Phage-Host pAiRs findER
Language:C0 0 00