/Variant-Mapper

Variant Mapper showcasing GA4GH Read API

Primary LanguagePython

Variant Mapper written to showcase the Read API of Global Alliance for Genomics and Health. This web application searches for reports filed by physicians and researches and compare those reports with a readset exposed by the Read API. A live server is running here.

Running the server

Prerequisites

  • MongoDB
  • Install required Python packages with following command:
$ pip install -r requirements.txt

Configuration

  • Edit settings.py.defalut and set your own Mongodb settings.
  • Set your own SECRET_KEY.
  • You will also need a Google API Key.
  • Save settings.py.default as settings.py

Run the server

  • To run the server locally, use command below:
$ python main.py