yf817

Attention-Gated-Networks

Use of Attention Gates in a Convolutional Neural Network / Medical Image Classification and Segmentation

Generative-Adversarial-Network-based-Synthesis-for-Supervised-Medical-Image-Segmentation

Code for the paper 'Generative Adversarial Network based Synthesis for Supervised Medical Image Segmentation'

ICRA2018

Matlab code used for the paper "Unscented Kalman Filtering on Lie Groups for Fusion of IMU and Monocular Vision"

LungNet

This is supplementary material for the manuscript: "Semantic Segmentation of Pathological Lung Tissue with Dilated Fully Convolutional Networks" M. Anthimopoulos, S. Christodoulidis, L. Ebner, A. Christe and S. Mougiakakou IEEE Journal of Biomedical and Health infomatics (2018)

MixNMatch

Pytorch implementation of MixNMatch

NiftyNet

An open-source convolutional neural networks platform for research in medical image analysis and image-guided therapy

OBELISK

MIDL 2018: one binary extremely large and inflecting sparse kernel (pytorch)

PerceptualSimilarity

Learned Perceptual Image Patch Similarity (LPIPS) metric and Berkeley-Adobe Perceptual Patch Similarity (BAPPS) dataset. In CVPR, 2018.

quicksilver

Predictive Image Registration

ThesisWork

Unsupervised Image Registration network based on Flownet+Spatial Transformer+Joint Saliency Map

yf817/ViT-FL-main

yf817/abdominal_registration

Deep learning based registration for Learn2Reg Challenge (Task 3 : CT Abdominal)

yf817/Algorithms

This repo contains the model architectures to be used in the OpenFL backend.

yf817/bioinformed_reg

This repository is the official implementation of "Learning correspondences of cardiac motion from images using biomechanics-informed modeling" accepted by MICCAI-STACOM 2022.

yf817/CarDEC

yf817/CCST

Official repo for the WACV 2023 paper: Federated Domain Generalization for Image Recognition via Cross-Client Style Transfer.

yf817/Conditional_LapIRN

Conditional Deformable Image Registration with Convolutional Neural Network

yf817/Conference-Acceptance-Rate

Acceptance rates for the major AI conferences

yf817/convexAdam

yf817/coupling_registration_segmentation

This repository is the official repository of the article U-ReSNet: Ultimate coupling of Registration and Segmentation with deep Nets presented in Miccai 2019 (Shenzhen)

yf817/DIRAC

This is the official Pytorch implementation of "Unsupervised Deformable Image Registration with Absent Correspondences in Pre-operative and Post-Recurrence Brain Tumor MRI Scans" (MICCAI 2022), written by Tony C. W. Mok and Albert C. S. Chung.

yf817/ImgX-DiffSeg

A JAX-based deep learning framework for image segmentation using diffusion models.

yf817/L2R

Repository for L2R evaluation files

yf817/LabelAssemble

Official Implementation for label-assemble in Medical Imaging Meets NeurIPS 2022

yf817/medical_mae

The official implementation of "Delving into Masked Autoencoders for Multi-Label Thorax Disease Classification"

yf817/MedSegDiff

Official implementation of paper "MedSegDiff: Medical Image Segmentation with Diffusion Probabilistic Model"

yf817/OpenSelfSup

Self-Supervised Learning Toolbox and Benchmark

yf817/Paper-Reading-Group

List shared papers in our group

yf817/partially-labelled

Learning to segment multi-organ and tumorsfrom multiple partially labeled datasets

yf817/PersonalizedFL

Personalized federated learning codebase for research

yf817/REFERS

yf817/registration-da-mean-teacher

Source code for our Miccai2022 paper "Adapting the Mean Teacher for keypoint-based lung registration under geometric domain shifts.

yf817/scvi-tools

Deep probabilistic analysis of single-cell omics data

yf817/SpaGCN

SpaGCN: Integrating gene expression, spatial location and histology to identify spatial domains and spatially variable genes by graph convolutional network

yf817/srijan-gsoc-2020

Healthcare-Researcher-Connector Package: Federated Learning tool for bridging the gap between Healthcare providers and researchers

yf817/SS-Net

Official Code for our MICCAI 2022 paper "Exploring Smoothness and Class-Separation for Semi-supervised Medical Image Segmentation"

yf817/SSL4MIS

Semi Supervised Learning for Medical Image Segmentation, a collection of literature reviews and code implementations.

yf817/sssegmentation

SSSegmentation: An Open Source Supervised Semantic Segmentation Toolbox Based on PyTorch.

yf817/TopoInteraction

This repository contains the implementation for our work "Learning Topological Interactions for Multi-Class Medical Image Segmentation", accepted to ECCV 2022 (Oral)

yf817/XMorpher

Open source for MICCAI2022 paper: [XMorpher: Full Transformer for Deformable Medical Image Registration via Cross Attention]