/ElegansIndividuality

C. elegans individuality analysis

Primary LanguageJuliaMIT LicenseMIT

C. elegans individuality analysis

This repository contains data and code related to individuality analysis in

Reemy Ali Nasser, Yuval Harel, Shay Stern (2023). Early-life experience reorganizes neuromodulatory regulation of stage-specific behavioral responses and individuality dimensions during development (https://doi.org/10.7554/eLife.84312)

input data files

Input data includes

  • well-list.csv: list of individual worms/wells and their strain and stress condition (Days Starvation, DS)
  • roam-frac-10.csv: roaming fraction for each worm in each of 10 bins per development stage

generating output

Run julia ./run.jl in the project's home dir. Output is generated in the output directory.

Tested with julia 1.7.2.