Pinned Repositories
cfmm2tar
continuous_max_flow_9.4T
dcm2niix
dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC
dcmrcvr
dicom lisener Dockerfile
deepbet
Fast brain extraction using neural networks
deeplearning_cpu_singularity
deeplearning_gpu_singularity
medial imaging deep learning singularity container
deploy_transparent_singularity_to_cc_template
dicom-anonymizer
dicom anonymizer
dicom_anonymization
yinglilu's Repositories
yinglilu/deeplearning_gpu_singularity
medial imaging deep learning singularity container
yinglilu/dcm2niix
dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC
yinglilu/deepbet
Fast brain extraction using neural networks
yinglilu/deeplearning_cpu_singularity
yinglilu/deploy_transparent_singularity_to_cc_template
yinglilu/dicom-anonymizer
dicom anonymizer
yinglilu/dicom_anonymization
yinglilu/Hippocampal_AutoTop
yinglilu/MICCAI-2009-left-ventricle-segmentation-challenge
MICCAI 2009 Workshop: Cardiac MR Left Ventricle Segmentation challenge evaluation MATLAB codes
yinglilu/mlflow-tracking-server-gcp-deployment
yinglilu/MONAI_gpu_singularity
yinglilu/neuroglia-helpers
Helper and wrapper scripts for using Singularity locally and on compute canada
yinglilu/docker-dcm4che
yinglilu/extractCMRRPhysio
yinglilu/extractCMRRPhysio_github_actions
yinglilu/LandmarkRegistrationEnhanced
yinglilu/mamba
yinglilu/MedMamba
This is the official code repository for "MedMamba: Vision Mamba for Medical Image Classification"
yinglilu/MRI-DeGad
Convolutional Neural Network for the Extraction of Gadolinium Contrast from T1-weighted MRI
yinglilu/nifti2dicom
Convert 3D NIfTI images (and other formats supported by ITK) to DICOM 2D series
yinglilu/niftynet_gpu_singularity
Niftynet GPU singularity container
yinglilu/nnUNet
yinglilu/print_3d_image_header
yinglilu/pytorch_gpu_singularity
A Pytorch deep learning singularity container
yinglilu/pyxnat
XNAT in Python
yinglilu/tractoflow
TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity
yinglilu/transparent-singularity
Deploying a singularity container so that it behaves like one would have installed software natively
yinglilu/vertex-ai-samples
Notebooks, code samples, sample apps, and other resources that demonstrate how to use, develop and manage machine learning and generative AI workflows using Google Cloud Vertex AI.
yinglilu/ViT-Forest-Fire-Detection
Computer Vision project focused on detecting smoke and fire in wild environments. The Google Vision Transformer was fine-tuned on a custom dataset.
yinglilu/zona-analysis
zona incerta study