yjingj

yjingj's Stars

• statgen/locuszoom

  A Javascript/d3 embeddable plugin for interactively visualizing statistical genetic data from customizable sources.

  Language:JavaScript15529

• statgen/pheweb

  A tool to build a website to browse hundreds or thousands of GWAS.

  Language:Python15866

• jrjohansson/scientific-python-lectures

  Lectures on scientific computing with python, as IPython notebooks.

  Language:Jupyter Notebook3.5k1.8k

• hyunmhwang/SVMCaT

  Language:R2

• jche453/BFGWAS_QUANT

  Language:C++11

• jche453/BGW-TWAS

  Language:C++12

• knmkr/lift-over-vcf

  UCSC liftOver (genome build converter) for vcf format

  Language:Python128

• genepi/imputationserver

  Michigan Imputation Server: A new web-based service for imputation that facilitates access to new reference panels and greatly improves user experience and productivity

  Language:Java7941

• mikelove/awesome-multi-omics

  List of software packages for multi-omics analysis

  727162

• seandavi/awesome-single-cell

  Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

  3.2k987

• aws-samples/aws-modern-application-workshop

  A tutorial for developers that want to learn about how to build modern applications on top of AWS. You will build a sample website that leverages infrastructure as code, containers, serverless code functions, CI/CD, and more.

  1.5k832

• biostatpzeng/DPR

  DPR: latent Dirichlet Process Regression for Genetic Prediction

  Language:C++72

• hakyim/TO-DELETE-PrediXcan

  Code for the in-dev PrediXcan Project

  Language:Python2883

• griffithlab/rnaseq_tutorial_v1

  Archive of original RNAseq.wiki tutorial that accompanied PLoS Comp Bio paper

  Language:R137

• traxexx/Raremetal

  A flexible tool for meta-analysis

  Language:C++42

• osxfuse/osxfuse

  FUSE extends macOS by adding support for user space file systems

  8.8k515

• joepickrell/fgwas

  Functional genomics and genome-wide association studies

  Language:C++6413

• Rdatatable/data.table

  R's data.table package extends data.frame:

  Language:R3.6k985

• samtools/samtools

  Tools (written in C using htslib) for manipulating next-generation sequencing data

  Language:C1.6k580

• statgen/gotcloud

  Genomes on the Cloud, Mapping & Variant Calling Pipelines

  Language:C++3219

• hadley/hadley.github.com

  Personal blog

  Language:JavaScript207