Pinned Repositories
bioconda-recipes
Conda recipes for the bioconda channel.
blasrbinary
Blasr binary for Ubuntu.
IsoSeq-3.0
User Documentation
isoseq-collapse-on-merged-bam
Scripts to fix an IsoSeq bug in SMRTLink 7.0 caused by chunking
IsoSeq3
IsoSeq3 - Scalable De Novo Isoform Discovery from Single-Molecule PacBio Reads
minimap2
A versatile pairwise aligner for genomic and spliced nucleotide sequences
pbtranscript
Copied from bioinformatics/tools/pbtranscript
yli-tutorial
bioinformatics tool usages and tutorials (e.g., bash, Python, meson, parasail)
ylipacbio's Repositories
ylipacbio/IsoSeq3
IsoSeq3 - Scalable De Novo Isoform Discovery from Single-Molecule PacBio Reads
ylipacbio/blasrbinary
Blasr binary for Ubuntu.
ylipacbio/IsoSeq-3.0
User Documentation
ylipacbio/minimap2
A versatile pairwise aligner for genomic and spliced nucleotide sequences
ylipacbio/pbtranscript
Copied from bioinformatics/tools/pbtranscript
ylipacbio/yli-tutorial
bioinformatics tool usages and tutorials (e.g., bash, Python, meson, parasail)
ylipacbio/bioconda-recipes
Conda recipes for the bioconda channel.
ylipacbio/isoseq-collapse-on-merged-bam
Scripts to fix an IsoSeq bug in SMRTLink 7.0 caused by chunking
ylipacbio/isoseq-demultiplex
Trace zmws of multiplexed isoseq sample to primers based on clustering
ylipacbio/itoolkits
My toolkits for internal analysis
ylipacbio/keras
Deep Learning for humans
ylipacbio/learn-tensorflow
Learning material for tensorflow
ylipacbio/pbbam
PacBio BAM C++ library
ylipacbio/pbcopper
Core C++ library for data structures, algorithms, and utilities
ylipacbio/pbmm2
A minimap2 frontend for PacBio native data formats
ylipacbio/pbove
A tool suite for evaluating pabcio aligners in the context of preassembly overlap detection
ylipacbio/pbsv_polish
Polish structural variants
ylipacbio/pbtranscript-internal-validation
ylipacbio/svkits
Tool kits for SV simulation, analysis, validations, tests and miscs
ylipacbio/tfccs